Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146266363-146719132

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk8 5 146231230 to 146302874 71644 + protein coding gene cyclin-dependent kinase 8
Tssr49777 5 146292628 to 146292649 21 + TSS region transcription start site region 49777
Gm38747 5 146353533 to 146362499 8966 + lncRNA gene predicted gene, 38747
Cpgi17028 5 146384934 to 146385670 736 CpG island CpG island 17028
Tssr49778 5 146384947 to 146384994 47 + TSS region transcription start site region 49778
Wasf3 5 146384990 to 146473615 88625 + protein coding gene WAS protein family, member 3
Tssr1751 5 146385235 to 146385236 1 + TSS region transcription start site region 1751
Tssr49779 5 146385239 to 146385252 13 + TSS region transcription start site region 49779
Tssr49780 5 146385262 to 146385313 51 + TSS region transcription start site region 49780
Tssr49781 5 146455561 to 146455566 5 + TSS region transcription start site region 49781
Tssr49782 5 146472658 to 146472675 17 + TSS region transcription start site region 49782
Gm6408 5 146481965 to 146484704 2739 + protein coding gene predicted gene 6408
Gm6370 5 146491363 to 146494132 2769 + protein coding gene predicted gene 6370
4930449I24Rik 5 146502399 to 146505183 2784 + protein coding gene RIKEN cDNA 4930449I24 gene
Gm3402 5 146514123 to 146516902 2779 + protein coding gene predicted gene 3402
Gm3404 5 146525801 to 146528553 2752 + protein coding gene predicted gene 3404
Gm3409 5 146537647 to 146540427 2780 + protein coding gene predicted gene 3409
Gm3415 5 146556136 to 146558915 2779 + protein coding gene predicted gene 3415
Gm8494 5 146574888 to 146576120 1232 + pseudogene predicted gene 8494
Gpr12 5 146582398 to 146585239 2841 - protein coding gene G-protein coupled receptor 12
Ath24 5 146583274 to 146583274 0 QTL atherosclerosis 24
Cpgi17029 5 146583283 to 146584011 728 CpG island CpG island 17029
Cpgi17030 5 146584307 to 146585346 1039 CpG island CpG island 17030
Tssr54476 5 146584827 to 146584880 53 - TSS region transcription start site region 54476
Gm34333 5 146586645 to 146600102 13457 - lincRNA gene predicted gene, 34333
Tssr54477 5 146655549 to 146655583 34 - TSS region transcription start site region 54477
Tssr54478 5 146655600 to 146655614 14 - TSS region transcription start site region 54478
Tssr1752 5 146661925 to 146661927 2 - TSS region transcription start site region 1752
Tssr54479 5 146687503 to 146687520 17 - TSS region transcription start site region 54479
Gm34700 5 146700483 to 146701442 959 + lncRNA gene predicted gene, 34700
Tssr1753 5 146706621 to 146706624 3 + TSS region transcription start site region 1753
4930573C15Rik 5 146706622 to 146707496 874 + lincRNA gene RIKEN cDNA 4930573C15 gene
Tssr49783 5 146706636 to 146706645 9 + TSS region transcription start site region 49783
Tssr49784 5 146706661 to 146706673 12 + TSS region transcription start site region 49784