Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146221333-146301344

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf6 5 146209193 to 146221457 12264 - protein coding gene ring finger protein (C3H2C3 type) 6
Cpgi17025 5 146220668 to 146221677 1009 CpG island CpG island 17025
Tssr54473 5 146221391 to 146221420 29 - TSS region transcription start site region 54473
Tssr54474 5 146221426 to 146221444 18 - TSS region transcription start site region 54474
Gm38745 5 146223717 to 146229035 5318 + lncRNA gene predicted gene, 38745
Cpgi17026 5 146230813 to 146232014 1201 CpG island CpG island 17026
Tssr49768 5 146231163 to 146231186 23 + TSS region transcription start site region 49768
Tssr49769 5 146231211 to 146231274 63 + TSS region transcription start site region 49769
Cdk8 5 146231230 to 146302874 71644 + protein coding gene cyclin-dependent kinase 8
6030446M11Rik 5 146242998 to 146243865 867 unclassified gene RIKEN cDNA 6030446M11 gene
Gm15739 5 146248551 to 146249422 871 + pseudogene predicted gene 15739
Cpgi17027 5 146260972 to 146261364 392 CpG island CpG island 17027
Tssr49770 5 146260984 to 146261028 44 + TSS region transcription start site region 49770
Tssr49771 5 146261048 to 146261088 40 + TSS region transcription start site region 49771
Tssr49772 5 146261145 to 146261177 32 + TSS region transcription start site region 49772
Tssr49773 5 146261239 to 146261253 14 + TSS region transcription start site region 49773
Tssr49774 5 146261255 to 146261295 40 + TSS region transcription start site region 49774
Tssr49775 5 146261299 to 146261327 28 + TSS region transcription start site region 49775
Tssr49776 5 146261333 to 146261344 11 + TSS region transcription start site region 49776
Tssr54475 5 146261343 to 146261362 19 - TSS region transcription start site region 54475
Tssr49777 5 146292628 to 146292649 21 + TSS region transcription start site region 49777