Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:145555545-145965706

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp3a41b 5 145558664 to 145584730 26066 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41B
Tssr54437 5 145584723 to 145584727 4 - TSS region transcription start site region 54437
Gm43381 5 145595796 to 145595960 164 - pseudogene predicted gene 43381
Selenok-ps7 5 145623085 to 145623367 282 - pseudogene selenoprotein K, pseudogene 7
Cyp3a63-ps 5 145624092 to 145633993 9901 - pseudogene cytochrome P450, family 3, subfamily a, member 63, pseudogene
Cyp3a41a 5 145694049 to 145720136 26087 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41A
Tssr54438 5 145720124 to 145720136 12 - TSS region transcription start site region 54438
Gm43626 5 145760545 to 145760706 161 + pseudogene predicted gene 43626
Selenok-ps2 5 145766200 to 145766914 714 - pseudogene selenoprotein K, pseudogene 2
Cyp3a44 5 145773983 to 145805874 31891 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 44
Tssr54439 5 145805862 to 145805876 14 - TSS region transcription start site region 54439
Tssr49763 5 145809784 to 145809786 2 + TSS region transcription start site region 49763
Gm19089 5 145823610 to 145827940 4330 + pseudogene predicted gene, 19089
Gm38744 5 145834612 to 145838276 3664 + lncRNA gene predicted gene, 38744
Cyp3a11 5 145854607 to 145879854 25247 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 11
Tssr54440 5 145854960 to 145854971 11 - TSS region transcription start site region 54440
Tssr54441 5 145855064 to 145855076 12 - TSS region transcription start site region 54441
Tssr54442 5 145855081 to 145855094 13 - TSS region transcription start site region 54442
Tssr54443 5 145856025 to 145856032 7 - TSS region transcription start site region 54443
Tssr54444 5 145857765 to 145857786 21 - TSS region transcription start site region 54444
Tssr54445 5 145860141 to 145860158 17 - TSS region transcription start site region 54445
D5Mit409 5 145862106 to 145862303 197 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 409
Tssr54446 5 145868581 to 145868598 17 - TSS region transcription start site region 54446
Tssr54447 5 145868990 to 145869015 25 - TSS region transcription start site region 54447
Tssr54448 5 145872400 to 145872423 23 - TSS region transcription start site region 54448
Tssr54449 5 145872466 to 145872478 12 - TSS region transcription start site region 54449
Tssr54450 5 145873501 to 145873532 31 - TSS region transcription start site region 54450
Tssr54451 5 145875196 to 145875245 49 - TSS region transcription start site region 54451
Tssr54452 5 145875267 to 145875293 26 - TSS region transcription start site region 54452
Tssr54453 5 145879311 to 145879344 33 - TSS region transcription start site region 54453
Tssr54454 5 145879857 to 145879872 15 - TSS region transcription start site region 54454
Tssr54455 5 145880056 to 145880057 1 - TSS region transcription start site region 54455
Gm42431 5 145918556 to 145918878 322 - pseudogene predicted gene 42431
Gm43624 5 145956052 to 145965050 8998 + pseudogene predicted gene 43624