Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:145288664-145854730

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zscan25 5 145280500 to 145291278 10778 + protein coding gene zinc finger and SCAN domain containing 25
Gm42636 5 145292770 to 145295008 2238 + unclassified gene predicted gene 42636
Tssr49760 5 145345254 to 145345270 16 + TSS region transcription start site region 49760
Del(5Cyp3a57-Cyp3a59)1Mtos 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr 5, Mitsuo Oshimura 1
Del(5Cyp3a57-Cyp3a59)1Ahs 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr 5, Alfred H Schinkel 1
Del(5Cyp3a57-Cyp3a59)1Arte 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr5, TaconicArtemis 1
Cyp3a57 5 145345279 to 145390926 45647 + protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 57
Tssr49761 5 145371716 to 145371718 2 + TSS region transcription start site region 49761
Gm2314 5 145400868 to 145401453 585 + pseudogene predicted gene 2314
Tssr49762 5 145404968 to 145404973 5 + TSS region transcription start site region 49762
Gm42859 5 145409648 to 145409840 192 + pseudogene predicted gene 42859
Cyp3a16 5 145436309 to 145469723 33414 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 16
Gm21016 5 145490415 to 145491968 1553 - pseudogene predicted gene, 21016
Cyp3a58-ps 5 145492612 to 145532629 40017 + pseudogene cytochrome P450, family 3, subfamily a, member 58, pseudogene
Gm42863 5 145504097 to 145507054 2957 - unclassified gene predicted gene 42863
Cyp3a41b 5 145558664 to 145584730 26066 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41B
Tssr54437 5 145584723 to 145584727 4 - TSS region transcription start site region 54437
Gm43381 5 145595796 to 145595960 164 - pseudogene predicted gene 43381
Selenok-ps7 5 145623085 to 145623367 282 - pseudogene selenoprotein K, pseudogene 7
Cyp3a63-ps 5 145624092 to 145633993 9901 - pseudogene cytochrome P450, family 3, subfamily a, member 63, pseudogene
Cyp3a41a 5 145694049 to 145720136 26087 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41A
Tssr54438 5 145720124 to 145720136 12 - TSS region transcription start site region 54438
Gm43626 5 145760545 to 145760706 161 + pseudogene predicted gene 43626
Selenok-ps2 5 145766200 to 145766914 714 - pseudogene selenoprotein K, pseudogene 2
Cyp3a44 5 145773983 to 145805874 31891 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 44
Tssr54439 5 145805862 to 145805876 14 - TSS region transcription start site region 54439
Tssr49763 5 145809784 to 145809786 2 + TSS region transcription start site region 49763
Gm19089 5 145823610 to 145827940 4330 + pseudogene predicted gene, 19089
Gm38744 5 145834612 to 145838276 3664 + lncRNA gene predicted gene, 38744
Cyp3a11 5 145854607 to 145879854 25247 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 11