Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:145255415-145726968

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr49756 5 145260176 to 145260179 3 + TSS region transcription start site region 49756
Tssr49757 5 145263919 to 145263921 2 + TSS region transcription start site region 49757
Gm9710 5 145265879 to 145266377 498 - pseudogene predicted gene 9710
Gm38740 5 145279506 to 145280623 1117 - lncRNA gene predicted gene, 38740
Cpgi17024 5 145280381 to 145281017 636 CpG island CpG island 17024
Tssr49758 5 145280464 to 145280510 46 + TSS region transcription start site region 49758
Zscan25 5 145280500 to 145291278 10778 + protein coding gene zinc finger and SCAN domain containing 25
Tssr49759 5 145280527 to 145280566 39 + TSS region transcription start site region 49759
Gm42636 5 145292770 to 145295008 2238 + unclassified gene predicted gene 42636
Tssr49760 5 145345254 to 145345270 16 + TSS region transcription start site region 49760
Cyp3a57 5 145345279 to 145390926 45647 + protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 57
Del(5Cyp3a57-Cyp3a59)1Ahs 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr 5, Alfred H Schinkel 1
Del(5Cyp3a57-Cyp3a59)1Arte 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr5, TaconicArtemis 1
Del(5Cyp3a57-Cyp3a59)1Mtos 5 145345279 to 146113287 768008 chromosomal deletion deletion, Chr 5, Mitsuo Oshimura 1
Tssr49761 5 145371716 to 145371718 2 + TSS region transcription start site region 49761
Gm2314 5 145400868 to 145401453 585 + pseudogene predicted gene 2314
Tssr49762 5 145404968 to 145404973 5 + TSS region transcription start site region 49762
Gm42859 5 145409648 to 145409840 192 + pseudogene predicted gene 42859
Cyp3a16 5 145436309 to 145469723 33414 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 16
Gm21016 5 145490415 to 145491968 1553 - pseudogene predicted gene, 21016
Cyp3a58-ps 5 145492612 to 145532629 40017 + pseudogene cytochrome P450, family 3, subfamily a, member 58, pseudogene
Gm42863 5 145504097 to 145507054 2957 - unclassified gene predicted gene 42863
Cyp3a41b 5 145558664 to 145584730 26066 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41B
Tssr54437 5 145584723 to 145584727 4 - TSS region transcription start site region 54437
Gm43381 5 145595796 to 145595960 164 - pseudogene predicted gene 43381
Selenok-ps7 5 145623085 to 145623367 282 - pseudogene selenoprotein K, pseudogene 7
Cyp3a63-ps 5 145624092 to 145633993 9901 - pseudogene cytochrome P450, family 3, subfamily a, member 63, pseudogene
Cyp3a41a 5 145694049 to 145720136 26087 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 41A
Tssr54438 5 145720124 to 145720136 12 - TSS region transcription start site region 54438