Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:145166549-145216565

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptcd1 5 145147514 to 145167108 19594 - protein coding gene pentatricopeptide repeat domain 1
Cpgi17019 5 145166893 to 145167855 962 CpG island CpG island 17019
Tssr54429 5 145167010 to 145167028 18 - TSS region transcription start site region 54429
Tssr54430 5 145167031 to 145167077 46 - TSS region transcription start site region 54430
Tssr49745 5 145167207 to 145167259 52 + TSS region transcription start site region 49745
Cpsf4 5 145167213 to 145182041 14828 + protein coding gene cleavage and polyadenylation specific factor 4
Atp5j2 5 145183706 to 145191592 7886 - protein coding gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
Cpgi17020 5 145190950 to 145191686 736 CpG island CpG island 17020
Tssr54431 5 145191534 to 145191548 14 - TSS region transcription start site region 54431
Tssr54432 5 145191549 to 145191565 16 - TSS region transcription start site region 54432
Tssr54433 5 145191566 to 145191572 6 - TSS region transcription start site region 54433
Zkscan14 5 145194946 to 145201868 6922 - protein coding gene zinc finger with KRAB and SCAN domains 14
Cpgi17021 5 145201282 to 145201953 671 CpG island CpG island 17021
Tssr54434 5 145201829 to 145201873 44 - TSS region transcription start site region 54434
Tssr54435 5 145201875 to 145201891 16 - TSS region transcription start site region 54435
Tssr49746 5 145204523 to 145204574 51 + TSS region transcription start site region 49746
Zkscan5 5 145204562 to 145221750 17188 + protein coding gene zinc finger with KRAB and SCAN domains 5
Tssr49747 5 145208555 to 145208562 7 + TSS region transcription start site region 49747
Tssr1749 5 145214533 to 145214539 6 + TSS region transcription start site region 1749