Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Xiaf2 | 5 | 18550382 | heritable phenotypic marker | X inactivation autosomal factor 2 | ||
Bhlha15 | 5 | 4155 | + | protein coding gene | basic helix-loop-helix family, member a15 | |
Tecpr1 | 5 | 29164 | - | protein coding gene | tectonin beta-propeller repeat containing 1 | |
Tssr54393 | 5 | 4 | - | TSS region | transcription start site region 54393 | |
Tssr49693 | 5 | 41 | + | TSS region | transcription start site region 49693 | |
Tssr54394 | 5 | 8 | - | TSS region | transcription start site region 54394 | |
Cpgi17005 | 5 | 1171 | CpG island | CpG island 17005 | ||
Tssr54395 | 5 | 102 | - | TSS region | transcription start site region 54395 | |
Tssr49694 | 5 | 59 | + | TSS region | transcription start site region 49694 | |
Gm43267 | 5 | 1795 | + | unclassified gene | predicted gene 43267 | |
2900089D17Rik | 5 | 14424 | - | antisense lncRNA gene | RIKEN cDNA 2900089D17 gene | |
Tssr54396 | 5 | 19 | - | TSS region | transcription start site region 54396 | |
Tssr49695 | 5 | 9 | + | TSS region | transcription start site region 49695 | |
Tssr49696 | 5 | 25 | + | TSS region | transcription start site region 49696 | |
Bri3 | 5 | 202320 | + | protein coding gene | brain protein I3 | |
6720454L20Rik | 5 | 971 | unclassified gene | RIKEN cDNA 6720454L20 gene | ||
Cpgi17006 | 5 | 1464 | CpG island | CpG island 17006 | ||
Tssr54397 | 5 | 12 | - | TSS region | transcription start site region 54397 | |
Tssr49697 | 5 | 19 | + | TSS region | transcription start site region 49697 | |
Tssr49698 | 5 | 40 | + | TSS region | transcription start site region 49698 | |
Tssr49699 | 5 | 14 | + | TSS region | transcription start site region 49699 | |
Tssr54398 | 5 | 19 | - | TSS region | transcription start site region 54398 | |
Tssr54399 | 5 | 23 | - | TSS region | transcription start site region 54399 | |
Tssr49700 | 5 | 22 | + | TSS region | transcription start site region 49700 | |
Tssr49701 | 5 | 18 | + | TSS region | transcription start site region 49701 | |
Tssr49702 | 5 | 18 | + | TSS region | transcription start site region 49702 | |
Tssr54400 | 5 | 57 | - | TSS region | transcription start site region 54400 | |
Tssr54401 | 5 | 39 | - | TSS region | transcription start site region 54401 | |
Tssr49703 | 5 | 29 | + | TSS region | transcription start site region 49703 | |
Tssr49704 | 5 | 21 | + | TSS region | transcription start site region 49704 | |
Tssr49705 | 5 | 18 | + | TSS region | transcription start site region 49705 | |
Gm38675 | 5 | 7598 | + | lncRNA gene | predicted gene, 38675 | |
Baiap2l1 | 5 | 93586 | - | protein coding gene | BAI1-associated protein 2-like 1 | |
Gm15708 | 5 | 3452 | + | sense intronic lncRNA gene | predicted gene 15708 | |
Tssr49706 | 5 | 40 | + | TSS region | transcription start site region 49706 | |
Tssr1745 | 5 | 7 | + | TSS region | transcription start site region 1745 | |
D5Mit377 | 5 | 225 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 377 | ||
Cpgi17007 | 5 | 1445 | CpG island | CpG island 17007 | ||
Dmrt1i | 5 | 3082 | + | sense intronic lncRNA gene | Dmrt1 interacting ncRNA | |
Tssr54402 | 5 | 9 | - | TSS region | transcription start site region 54402 | |
Tssr54403 | 5 | 5 | - | TSS region | transcription start site region 54403 | |
Tssr54404 | 5 | 56 | - | TSS region | transcription start site region 54404 | |
Tssr54405 | 5 | 20 | - | TSS region | transcription start site region 54405 | |
Tssr49707 | 5 | 3 | + | TSS region | transcription start site region 49707 | |
Tssr49708 | 5 | 26 | + | TSS region | transcription start site region 49708 | |
Gm15709 | 5 | 212 | + | pseudogene | predicted gene 15709 | |
Cpgi17008 | 5 | 285 | CpG island | CpG island 17008 | ||
Gm33552 | 5 | 4228 | - | lncRNA gene | predicted gene, 33552 | |
D5Mit429 | 5 | 91 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 429 | ||
Gm33714 | 5 | 13885 | - | lncRNA gene | predicted gene, 33714 | |
Tssr54406 | 5 | 13 | - | TSS region | transcription start site region 54406 | |
Tssr54407 | 5 | 11 | - | TSS region | transcription start site region 54407 | |
Tssr54408 | 5 | 15 | - | TSS region | transcription start site region 54408 | |
Gm33765 | 5 | 25039 | - | lncRNA gene | predicted gene, 33765 | |
D5Dcr35 | 5 | 102 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 35 | ||
4930568B11Rik | 5 | 1148 | unclassified gene | RIKEN cDNA 4930568B11 gene | ||
Cpgi17009 | 5 | 1745 | CpG island | CpG island 17009 | ||
Tssr49709 | 5 | 6 | + | TSS region | transcription start site region 49709 | |
Nptx2 | 5 | 11576 | + | protein coding gene | neuronal pentraxin 2 | |
Cpgi17010 | 5 | 187 | CpG island | CpG island 17010 | ||
Cpgi17011 | 5 | 275 | CpG island | CpG island 17011 | ||
Tssr49710 | 5 | 4 | + | TSS region | transcription start site region 49710 | |
D5Mit191 | 5 | 147 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 191 | ||
D5Mit43 | 5 | 130 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 43 | ||
D5Dcr36 | 5 | 96 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 36 | ||
D5Mit43.2 | 5 | 120 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 43.2 | ||
Gm6272 | 5 | 170 | - | pseudogene | predicted pseudogene 6272 | |
Tmem130 | 5 | 25663 | - | protein coding gene | transmembrane protein 130 | |
Tssr54409 | 5 | 11 | - | TSS region | transcription start site region 54409 | |
Cpgi17012 | 5 | 683 | CpG island | CpG island 17012 | ||
Tssr54410 | 5 | 11 | - | TSS region | transcription start site region 54410 | |
Tssr54411 | 5 | 53 | - | TSS region | transcription start site region 54411 | |
Tssr54412 | 5 | 11 | - | TSS region | transcription start site region 54412 | |
Gm38739 | 5 | 2503 | + | lncRNA gene | predicted gene, 38739 | |
Trrap | 5 | 92040 | + | protein coding gene | transformation/transcription domain-associated protein | |
Cpgi17013 | 5 | 1286 | CpG island | CpG island 17013 | ||
Tssr49711 | 5 | 58 | + | TSS region | transcription start site region 49711 | |
Tssr49712 | 5 | 7 | + | TSS region | transcription start site region 49712 | |
Tssr49713 | 5 | 13 | + | TSS region | transcription start site region 49713 | |
Tssr49714 | 5 | 24 | + | TSS region | transcription start site region 49714 | |
Tssr49715 | 5 | 27 | + | TSS region | transcription start site region 49715 | |
Tssr49716 | 5 | 16 | + | TSS region | transcription start site region 49716 | |
Tssr49717 | 5 | 13 | + | TSS region | transcription start site region 49717 | |
Tssr49718 | 5 | 13 | + | TSS region | transcription start site region 49718 | |
Gm23995 | 5 | 128 | + | snoRNA gene | predicted gene, 23995 | |
Tssr49719 | 5 | 6 | + | TSS region | transcription start site region 49719 | |
Cpgi17014 | 5 | 396 | CpG island | CpG island 17014 | ||
Tssr49720 | 5 | 4 | + | TSS region | transcription start site region 49720 | |
Smurf1 | 5 | 89335 | - | protein coding gene | SMAD specific E3 ubiquitin protein ligase 1 | |
Tssr54413 | 5 | 12 | - | TSS region | transcription start site region 54413 | |
Mir7039 | 5 | 84 | - | miRNA gene | microRNA 7039 | |
Gm33821 | 5 | 4317 | + | lncRNA gene | predicted gene, 33821 | |
Tssr49721 | 5 | 6 | + | TSS region | transcription start site region 49721 | |
Cpgi17015 | 5 | 1751 | CpG island | CpG island 17015 | ||
Tssr54414 | 5 | 23 | - | TSS region | transcription start site region 54414 | |
Tssr54415 | 5 | 84 | - | TSS region | transcription start site region 54415 | |
Tssr54416 | 5 | 13 | - | TSS region | transcription start site region 54416 | |
Kpna7 | 5 | 25909 | - | protein coding gene | karyopherin alpha 7 (importin alpha 8) | |
Gm33904 | 5 | 12305 | + | lncRNA gene | predicted gene, 33904 | |
Gm43563 | 5 | 840 | + | pseudogene | predicted gene 43563 | |
Gm4871 | 5 | 3154 | - | protein coding gene | predicted gene 4871 | |
Gm43562 | 5 | 623 | + | lincRNA gene | predicted gene 43562 | |
Gm43561 | 5 | 447 | - | pseudogene | predicted gene 43561 | |
Tssr1746 | 5 | 5 | + | TSS region | transcription start site region 1746 | |
Tssr1747 | 5 | 12 | + | TSS region | transcription start site region 1747 | |
1700018F24Rik | 5 | 2691 | + | protein coding gene | RIKEN cDNA 1700018F24 gene | |
Cpgi17016 | 5 | 593 | CpG island | CpG island 17016 | ||
Tssr49722 | 5 | 56 | + | TSS region | transcription start site region 49722 | |
Arpc1a | 5 | 24887 | + | protein coding gene | actin related protein 2/3 complex, subunit 1A | |
Tssr49723 | 5 | 24 | + | TSS region | transcription start site region 49723 | |
Tssr49724 | 5 | 11 | + | TSS region | transcription start site region 49724 | |
Tssr49725 | 5 | 9 | + | TSS region | transcription start site region 49725 | |
Tssr49726 | 5 | 13 | + | TSS region | transcription start site region 49726 | |
Tssr49727 | 5 | 19 | + | TSS region | transcription start site region 49727 | |
Tssr49728 | 5 | 11 | + | TSS region | transcription start site region 49728 | |
Tssr49729 | 5 | 62 | + | TSS region | transcription start site region 49729 | |
Tssr1748 | 5 | 5 | + | TSS region | transcription start site region 1748 | |
Cpgi17017 | 5 | 1245 | CpG island | CpG island 17017 | ||
Tssr49730 | 5 | 26 | + | TSS region | transcription start site region 49730 | |
Arpc1b | 5 | 13930 | + | protein coding gene | actin related protein 2/3 complex, subunit 1B | |
Tssr49731 | 5 | 20 | + | TSS region | transcription start site region 49731 | |
Tssr49732 | 5 | 54 | + | TSS region | transcription start site region 49732 | |
Tssr49733 | 5 | 36 | + | TSS region | transcription start site region 49733 | |
Tssr49734 | 5 | 29 | + | TSS region | transcription start site region 49734 | |
Tssr49735 | 5 | 1 | + | TSS region | transcription start site region 49735 | |
Tssr49736 | 5 | 19 | + | TSS region | transcription start site region 49736 | |
Tssr49737 | 5 | 16 | + | TSS region | transcription start site region 49737 | |
Tssr49738 | 5 | 3 | + | TSS region | transcription start site region 49738 | |
Tssr49739 | 5 | 17 | + | TSS region | transcription start site region 49739 | |
Tssr54417 | 5 | 4 | - | TSS region | transcription start site region 54417 | |
Tssr49740 | 5 | 34 | + | TSS region | transcription start site region 49740 | |
Tssr54418 | 5 | 49 | - | TSS region | transcription start site region 54418 | |
Pdap1 | 5 | 11319 | - | protein coding gene | PDGFA associated protein 1 | |
Tssr49741 | 5 | 36 | + | TSS region | transcription start site region 49741 | |
Tssr54419 | 5 | 6 | - | TSS region | transcription start site region 54419 | |
Tssr54420 | 5 | 29 | - | TSS region | transcription start site region 54420 | |
Tssr49742 | 5 | 25 | + | TSS region | transcription start site region 49742 | |
Tssr54421 | 5 | 20 | - | TSS region | transcription start site region 54421 | |
Tssr54422 | 5 | 17 | - | TSS region | transcription start site region 54422 | |
Tssr54423 | 5 | 19 | - | TSS region | transcription start site region 54423 | |
Tssr54424 | 5 | 31 | - | TSS region | transcription start site region 54424 | |
Tssr54425 | 5 | 10 | - | TSS region | transcription start site region 54425 | |
Cpgi17018 | 5 | 1238 | CpG island | CpG island 17018 | ||
Tssr54426 | 5 | 11 | - | TSS region | transcription start site region 54426 | |
Tssr54427 | 5 | 35 | - | TSS region | transcription start site region 54427 | |
Tssr54428 | 5 | 24 | - | TSS region | transcription start site region 54428 | |
Tssr49743 | 5 | 49 | + | TSS region | transcription start site region 49743 | |
Bud31 | 5 | 7702 | + | protein coding gene | BUD31 homolog | |
Tssr49744 | 5 | 12 | + | TSS region | transcription start site region 49744 | |
Ptcd1 | 5 | 19594 | - | protein coding gene | pentatricopeptide repeat domain 1 | |
Cpgi17019 | 5 | 962 | CpG island | CpG island 17019 | ||
Tssr54429 | 5 | 18 | - | TSS region | transcription start site region 54429 | |
Tssr54430 | 5 | 46 | - | TSS region | transcription start site region 54430 | |
Tssr49745 | 5 | 52 | + | TSS region | transcription start site region 49745 | |
Cpsf4 | 5 | 14828 | + | protein coding gene | cleavage and polyadenylation specific factor 4 | |
Atp5j2 | 5 | 7886 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 | |
Cpgi17020 | 5 | 736 | CpG island | CpG island 17020 | ||
Tssr54431 | 5 | 14 | - | TSS region | transcription start site region 54431 | |
Tssr54432 | 5 | 16 | - | TSS region | transcription start site region 54432 | |
Tssr54433 | 5 | 6 | - | TSS region | transcription start site region 54433 | |
Zkscan14 | 5 | 6922 | - | protein coding gene | zinc finger with KRAB and SCAN domains 14 | |
Cpgi17021 | 5 | 671 | CpG island | CpG island 17021 | ||
Tssr54434 | 5 | 44 | - | TSS region | transcription start site region 54434 | |
Tssr54435 | 5 | 16 | - | TSS region | transcription start site region 54435 | |
Tssr49746 | 5 | 51 | + | TSS region | transcription start site region 49746 | |
Zkscan5 | 5 | 17188 | + | protein coding gene | zinc finger with KRAB and SCAN domains 5 | |
Tssr49747 | 5 | 7 | + | TSS region | transcription start site region 49747 | |
Tssr1749 | 5 | 6 | + | TSS region | transcription start site region 1749 | |
Cpgi17022 | 5 | 751 | CpG island | CpG island 17022 | ||
Gm6287 | 5 | 1789 | unclassified gene | predicted gene 6287 | ||
Cpgi17023 | 5 | 1044 | CpG island | CpG island 17023 | ||
Tssr54436 | 5 | 11 | - | TSS region | transcription start site region 54436 | |
Tssr49748 | 5 | 44 | + | TSS region | transcription start site region 49748 | |
Zfp655 | 5 | 15587 | + | protein coding gene | zinc finger protein 655 | |
Tssr49749 | 5 | 26 | + | TSS region | transcription start site region 49749 | |
Tssr49750 | 5 | 7 | + | TSS region | transcription start site region 49750 | |
Tssr49751 | 5 | 32 | + | TSS region | transcription start site region 49751 | |
Tssr49752 | 5 | 9 | + | TSS region | transcription start site region 49752 | |
Tssr49753 | 5 | 13 | + | TSS region | transcription start site region 49753 | |
Tssr49754 | 5 | 31 | + | TSS region | transcription start site region 49754 | |
Tssr49755 | 5 | 3 | + | TSS region | transcription start site region 49755 | |
Tssr49756 | 5 | 3 | + | TSS region | transcription start site region 49756 | |
Tssr49757 | 5 | 2 | + | TSS region | transcription start site region 49757 | |
Gm9710 | 5 | 498 | - | pseudogene | predicted gene 9710 | |
Gm38740 | 5 | 1117 | - | lncRNA gene | predicted gene, 38740 | |
Cpgi17024 | 5 | 636 | CpG island | CpG island 17024 | ||
Tssr49758 | 5 | 46 | + | TSS region | transcription start site region 49758 | |
Zscan25 | 5 | 10778 | + | protein coding gene | zinc finger and SCAN domain containing 25 | |
Tssr49759 | 5 | 39 | + | TSS region | transcription start site region 49759 | |
Gm42636 | 5 | 2238 | + | unclassified gene | predicted gene 42636 | |
Tssr49760 | 5 | 16 | + | TSS region | transcription start site region 49760 | |
Del(5Cyp3a57-Cyp3a59)1Ahs | 5 | 768008 | chromosomal deletion | deletion, Chr 5, Alfred H Schinkel 1 | ||
Del(5Cyp3a57-Cyp3a59)1Arte | 5 | 768008 | chromosomal deletion | deletion, Chr5, TaconicArtemis 1 | ||
Del(5Cyp3a57-Cyp3a59)1Mtos | 5 | 768008 | chromosomal deletion | deletion, Chr 5, Mitsuo Oshimura 1 | ||
Cyp3a57 | 5 | 45647 | + | protein coding gene | cytochrome P450, family 3, subfamily a, polypeptide 57 | |
Tssr49761 | 5 | 2 | + | TSS region | transcription start site region 49761 | |
Gm2314 | 5 | 585 | + | pseudogene | predicted gene 2314 | |
Tssr49762 | 5 | 5 | + | TSS region | transcription start site region 49762 | |
Gm42859 | 5 | 192 | + | pseudogene | predicted gene 42859 | |
Cyp3a16 | 5 | 33414 | - | protein coding gene | cytochrome P450, family 3, subfamily a, polypeptide 16 |