Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:143340061-143400079

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TSaga2 5 143347066 to 143347192 126 - tRNA gene nuclear encoded tRNA serine 2 (anticodon AGA)
D5Mit67 5 143349572 to 143349683 111 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 67
Tssr49644 5 143353703 to 143353710 7 + TSS region transcription start site region 49644
Grid2ip 5 143357338 to 143391798 34460 + protein coding gene glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
Cpgi16983 5 143357520 to 143358018 498 CpG island CpG island 16983
Tssr49645 5 143363890 to 143363919 29 + TSS region transcription start site region 49645
Cpgi16984 5 143364058 to 143364620 562 CpG island CpG island 16984
Cpgi16985 5 143369839 to 143370664 825 CpG island CpG island 16985
Tssr49646 5 143370061 to 143370079 18 + TSS region transcription start site region 49646
Tssr49647 5 143370104 to 143370118 14 + TSS region transcription start site region 49647
Cpgi16986 5 143372558 to 143373693 1135 CpG island CpG island 16986
Gm38736 5 143373215 to 143375252 2037 - lncRNA gene predicted gene, 38736
Cpgi16987 5 143375252 to 143375756 504 CpG island CpG island 16987
Tssr54369 5 143375701 to 143375737 36 - TSS region transcription start site region 54369
Cpgi16988 5 143381635 to 143381950 315 CpG island CpG island 16988
Cpgi16989 5 143387134 to 143387627 493 CpG island CpG island 16989
Gm20635 5 143391789 to 143403695 11906 - antisense lncRNA gene predicted gene 20635
Gm42504 5 143393689 to 143397457 3768 - lincRNA gene predicted gene 42504
Gm43398 5 143395503 to 143398244 2741 + unclassified gene predicted gene 43398
9530056K15Rik 5 143397248 to 143399563 2315 - unclassified gene RIKEN cDNA 9530056K15 gene