Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:143141006-143221009

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr54352 5 143154695 to 143154704 9 - TSS region transcription start site region 54352
Tssr54353 5 143154973 to 143154994 21 - TSS region transcription start site region 54353
Cpgi16972 5 143157119 to 143157672 553 CpG island CpG island 16972
Gm7291 5 143157161 to 143157542 381 - pseudogene predicted gene 7291
Gm44405 5 143157177 to 143157302 125 + miRNA gene predicted gene, 44405
Rbakdn 5 143164779 to 143165751 972 - lincRNA gene RB-associated KRAB zinc finger downstream neighbor (non-protein coding)
Cpgi16973 5 143165427 to 143165956 529 CpG island CpG island 16973
Tssr54354 5 143165676 to 143165715 39 - TSS region transcription start site region 54354
Tssr54355 5 143165719 to 143165733 14 - TSS region transcription start site region 54355
Tssr54356 5 143165736 to 143165769 33 - TSS region transcription start site region 54356
Rbak 5 143172186 to 143180775 8589 - protein coding gene RB-associated KRAB zinc finger
Cpgi16974 5 143180304 to 143181022 718 CpG island CpG island 16974
Tssr54357 5 143180721 to 143180795 74 - TSS region transcription start site region 54357
Tssr54358 5 143180798 to 143180814 16 - TSS region transcription start site region 54358
Tssr49637 5 143180921 to 143180962 41 + TSS region transcription start site region 49637
Tssr49638 5 143181006 to 143181009 3 + TSS region transcription start site region 49638
Tssr49639 5 143181010 to 143181028 18 + TSS region transcription start site region 49639
Spdye4b 5 143181017 to 143205075 24058 + protein coding gene speedy/RINGO cell cycle regulator family, member E4B
Spdye4a 5 143216316 to 143226890 10574 - protein coding gene speedy/RINGO cell cycle regulator family, member E4A