Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:142905355-143028189

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actb 5 142903115 to 142906754 3639 - protein coding gene actin, beta
Tssr49607 5 142905347 to 142905359 12 + TSS region transcription start site region 49607
Tssr54336 5 142905379 to 142905401 22 - TSS region transcription start site region 54336
Tssr49608 5 142905404 to 142905440 36 + TSS region transcription start site region 49608
Tssr54337 5 142905406 to 142905418 12 - TSS region transcription start site region 54337
Cpgi16964 5 142905427 to 142907197 1770 CpG island CpG island 16964
Tssr54338 5 142905442 to 142905480 38 - TSS region transcription start site region 54338
Tssr54339 5 142905593 to 142905625 32 - TSS region transcription start site region 54339
Tssr54340 5 142905696 to 142905718 22 - TSS region transcription start site region 54340
Tssr54341 5 142905735 to 142905753 18 - TSS region transcription start site region 54341
Tssr54342 5 142905762 to 142905796 34 - TSS region transcription start site region 54342
Tssr54343 5 142905816 to 142905832 16 - TSS region transcription start site region 54343
Tssr54344 5 142905928 to 142905978 50 - TSS region transcription start site region 54344
Tssr1738 5 142905992 to 142905999 7 - TSS region transcription start site region 1738
Tssr1739 5 142906009 to 142906031 22 - TSS region transcription start site region 1739
Tssr54345 5 142906721 to 142906726 5 - TSS region transcription start site region 54345
Tssr1740 5 142907965 to 142907982 17 - TSS region transcription start site region 1740
Tssr49609 5 142909313 to 142909359 46 + TSS region transcription start site region 49609
Tssr1741 5 142909982 to 142909992 10 + TSS region transcription start site region 1741
Tssr49610 5 142920999 to 142921011 12 + TSS region transcription start site region 49610
Cpgi16965 5 142928939 to 142929664 725 CpG island CpG island 16965
Tssr54346 5 142929088 to 142929127 39 - TSS region transcription start site region 54346
Tssr49611 5 142929213 to 142929223 10 + TSS region transcription start site region 49611
Tssr49612 5 142929773 to 142929778 5 + TSS region transcription start site region 49612
Cpgi16966 5 142936419 to 142936589 170 CpG island CpG island 16966
Cpgi16967 5 142959989 to 142961524 1535 CpG island CpG island 16967
Tssr49613 5 142960348 to 142960363 15 + TSS region transcription start site region 49613
Fscn1 5 142960355 to 142973189 12834 + protein coding gene fascin actin-bundling protein 1
Tssr49614 5 142960477 to 142960493 16 + TSS region transcription start site region 49614
Tssr49615 5 142960958 to 142960990 32 + TSS region transcription start site region 49615
Tssr49616 5 142961000 to 142961020 20 + TSS region transcription start site region 49616
Tssr49617 5 142961188 to 142961200 12 + TSS region transcription start site region 49617
Cpgi16968 5 142961799 to 142962514 715 CpG island CpG island 16968
Tssr49618 5 142963678 to 142963689 11 + TSS region transcription start site region 49618
Tssr49619 5 142970514 to 142970526 12 + TSS region transcription start site region 49619
Tssr49620 5 142970541 to 142970562 21 + TSS region transcription start site region 49620
Tssr49621 5 142970569 to 142970592 23 + TSS region transcription start site region 49621
Tssr49622 5 142972087 to 142972100 13 + TSS region transcription start site region 49622
Tssr49623 5 142972115 to 142972133 18 + TSS region transcription start site region 49623
Tssr49624 5 142972242 to 142972258 16 + TSS region transcription start site region 49624
Tssr49625 5 142972293 to 142972311 18 + TSS region transcription start site region 49625
Tssr49626 5 142972335 to 142972354 19 + TSS region transcription start site region 49626
Tssr49627 5 142972367 to 142972393 26 + TSS region transcription start site region 49627
Tssr49628 5 142972415 to 142972433 18 + TSS region transcription start site region 49628
Tssr49629 5 142972440 to 142972496 56 + TSS region transcription start site region 49629
Tssr49630 5 142972684 to 142972726 42 + TSS region transcription start site region 49630
Tssr49631 5 142972774 to 142972781 7 + TSS region transcription start site region 49631
Tssr49632 5 142972844 to 142972870 26 + TSS region transcription start site region 49632
Tssr49633 5 142972879 to 142972892 13 + TSS region transcription start site region 49633
Tssr49634 5 142973027 to 142973051 24 + TSS region transcription start site region 49634
Cpgi16969 5 142974766 to 142974994 228 CpG island CpG island 16969
Rnf216 5 142990893 to 143112994 122101 - protein coding gene ring finger protein 216
Tssr54347 5 143018170 to 143018177 7 - TSS region transcription start site region 54347
Tssr49635 5 143027815 to 143027820 5 + TSS region transcription start site region 49635