MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:142688912-142778930

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm40352	5	142671869 to 142693356	21487	-	lncRNA gene	predicted gene, 40352
Cpgi16953	5	142692337 to 142692537	200		CpG island	CpG island 16953
Tssr49584	5	142692457 to 142692481	24	+	TSS region	transcription start site region 49584
Tssr49585	5	142692482 to 142692502	20	+	TSS region	transcription start site region 49585
Slc29a4	5	142692512 to 142722490	29978	+	protein coding gene	solute carrier family 29 (nucleoside transporters), member 4
Tssr49586	5	142694098 to 142694102	4	+	TSS region	transcription start site region 49586
Cpgi16954	5	142701581 to 142702718	1137		CpG island	CpG island 16954
Tssr49587	5	142702091 to 142702153	62	+	TSS region	transcription start site region 49587
Tnrc18	5	142724661 to 142817662	93001	-	protein coding gene	trinucleotide repeat containing 18
Tssr1733	5	142733912 to 142733930	18	-	TSS region	transcription start site region 1733
Tssr1734	5	142734037 to 142734047	10	+	TSS region	transcription start site region 1734
Tssr1735	5	142734066 to 142734073	7	+	TSS region	transcription start site region 1735
4921504P13Rik	5	142734069 to 142735070	1001		unclassified gene	RIKEN cDNA 4921504P13 gene
Tssr1736	5	142742190 to 142742195	5	-	TSS region	transcription start site region 1736
Tssr54288	5	142746719 to 142746721	2	-	TSS region	transcription start site region 54288
Cpgi16955	5	142761536 to 142761718	182		CpG island	CpG island 16955
Cpgi16956	5	142764597 to 142764825	228		CpG island	CpG island 16956
Tssr54289	5	142774184 to 142774199	15	-	TSS region	transcription start site region 54289