Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:142676719-142816721

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40352 5 142671869 to 142693356 21487 - lncRNA gene predicted gene, 40352
Cpgi16953 5 142692337 to 142692537 200 CpG island CpG island 16953
Tssr49584 5 142692457 to 142692481 24 + TSS region transcription start site region 49584
Tssr49585 5 142692482 to 142692502 20 + TSS region transcription start site region 49585
Slc29a4 5 142692512 to 142722490 29978 + protein coding gene solute carrier family 29 (nucleoside transporters), member 4
Tssr49586 5 142694098 to 142694102 4 + TSS region transcription start site region 49586
Cpgi16954 5 142701581 to 142702718 1137 CpG island CpG island 16954
Tssr49587 5 142702091 to 142702153 62 + TSS region transcription start site region 49587
Tnrc18 5 142724661 to 142817662 93001 - protein coding gene trinucleotide repeat containing 18
Tssr1733 5 142733912 to 142733930 18 - TSS region transcription start site region 1733
Tssr1734 5 142734037 to 142734047 10 + TSS region transcription start site region 1734
Tssr1735 5 142734066 to 142734073 7 + TSS region transcription start site region 1735
4921504P13Rik 5 142734069 to 142735070 1001 unclassified gene RIKEN cDNA 4921504P13 gene
Tssr1736 5 142742190 to 142742195 5 - TSS region transcription start site region 1736
Tssr54288 5 142746719 to 142746721 2 - TSS region transcription start site region 54288
Cpgi16955 5 142761536 to 142761718 182 CpG island CpG island 16955
Cpgi16956 5 142764597 to 142764825 228 CpG island CpG island 16956
Tssr54289 5 142774184 to 142774199 15 - TSS region transcription start site region 54289
Cpgi16957 5 142787424 to 142788247 823 CpG island CpG island 16957
Tssr1737 5 142794686 to 142794697 11 - TSS region transcription start site region 1737
Tssr54290 5 142794720 to 142794782 62 - TSS region transcription start site region 54290
Tssr54291 5 142800422 to 142800442 20 - TSS region transcription start site region 54291
Tssr54292 5 142802984 to 142802987 3 - TSS region transcription start site region 54292
Gm31365 5 142811779 to 142815997 4218 + lncRNA gene predicted gene, 31365
Tssr49588 5 142812158 to 142812173 15 + TSS region transcription start site region 49588
Cpgi16958 5 142813812 to 142815793 1981 CpG island CpG island 16958
Tssr49589 5 142813997 to 142814003 6 + TSS region transcription start site region 49589
Tssr54293 5 142815342 to 142815361 19 - TSS region transcription start site region 54293
Tssr54294 5 142815406 to 142815477 71 - TSS region transcription start site region 54294
Tssr54295 5 142815812 to 142815861 49 - TSS region transcription start site region 54295
Cpgi16959 5 142816562 to 142818662 2100 CpG island CpG island 16959
Tssr54296 5 142816591 to 142816625 34 - TSS region transcription start site region 54296