Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:140471435-140621838

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm4869 5 140456901 to 140495884 38983 + protein coding gene predicted gene 4869
D5Dcr25 5 140502074 to 140502169 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 25
Cpgi16923 5 140502627 to 140502850 223 CpG island CpG island 16923
Gm38728 5 140503087 to 140518270 15183 - lncRNA gene predicted gene, 38728
Cpgi16924 5 140505322 to 140506489 1167 CpG island CpG island 16924
Chst12 5 140505580 to 140525238 19658 + protein coding gene carbohydrate sulfotransferase 12
Tssr49550 5 140505620 to 140505666 46 + TSS region transcription start site region 49550
Tssr54219 5 140507597 to 140507601 4 - TSS region transcription start site region 54219
Tssr49551 5 140507734 to 140507743 9 + TSS region transcription start site region 49551
Gm42808 5 140545486 to 140546392 906 - lincRNA gene predicted gene 42808
Gm32158 5 140546435 to 140546838 403 + pseudogene predicted gene, 32158
Grifin 5 140563119 to 140565071 1952 - protein coding gene galectin-related inter-fiber protein
Tssr54220 5 140565060 to 140565072 12 - TSS region transcription start site region 54220
Gm30603 5 140589100 to 140596595 7495 - lncRNA gene predicted gene, 30603
Tssr54221 5 140596548 to 140596580 32 - TSS region transcription start site region 54221
Tssr54222 5 140596583 to 140596603 20 - TSS region transcription start site region 54222
Gm43703 5 140605789 to 140606551 762 - lincRNA gene predicted gene 43703
Cpgi16925 5 140606283 to 140608100 1817 CpG island CpG island 16925
Tssr49552 5 140607334 to 140607352 18 + TSS region transcription start site region 49552
Lfng 5 140607341 to 140615545 8204 + protein coding gene LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Tssr49553 5 140607703 to 140607754 51 + TSS region transcription start site region 49553
Cpgi16926 5 140608705 to 140608865 160 CpG island CpG island 16926
Tssr54223 5 140609682 to 140609691 9 - TSS region transcription start site region 54223
Cpgi16927 5 140610589 to 140611173 584 CpG island CpG island 16927
Tssr49554 5 140612541 to 140612577 36 + TSS region transcription start site region 49554
Tssr49555 5 140616990 to 140617009 19 + TSS region transcription start site region 49555
Ttyh3 5 140620578 to 140649031 28453 - protein coding gene tweety family member 3
Tssr54224 5 140621293 to 140621308 15 - TSS region transcription start site region 54224
Tssr54225 5 140621398 to 140621430 32 - TSS region transcription start site region 54225