MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:139979719-140215186

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16917	5	140002281 to 140002749	468		CpG island	CpG island 16917
Mad1l1	5	140008689 to 140321552	312863	-	protein coding gene	MAD1 mitotic arrest deficient 1-like 1
Gm43702	5	140029631 to 140032176	2545	-	unclassified gene	predicted gene 43702
Tssr49536	5	140062461 to 140062468	7	+	TSS region	transcription start site region 49536
Gm16122	5	140074105 to 140085512	11407	+	antisense lncRNA gene	predicted gene 16122
Gm30492	5	140094719 to 140100186	5467	+	lncRNA gene	predicted gene, 30492
Gm16121	5	140101199 to 140107591	6392	+	antisense lncRNA gene	predicted gene 16121
Tssr54190	5	140105824 to 140105852	28	-	TSS region	transcription start site region 54190
Tssr54191	5	140118040 to 140118056	16	-	TSS region	transcription start site region 54191
Tssr54192	5	140118060 to 140118069	9	-	TSS region	transcription start site region 54192
Gm43195	5	140149156 to 140151487	2331	-	unclassified gene	predicted gene 43195
Tssr54193	5	140174801 to 140174813	12	-	TSS region	transcription start site region 54193
Tssr54194	5	140201155 to 140201175	20	-	TSS region	transcription start site region 54194
Tssr54195	5	140206046 to 140206057	11	-	TSS region	transcription start site region 54195
Gm16120	5	140207385 to 140210751	3366	+	antisense lncRNA gene	predicted gene 16120
Tssr54196	5	140208728 to 140208747	19	-	TSS region	transcription start site region 54196
Cpgi16918	5	140208734 to 140209054	320		CpG island	CpG island 16918
Tssr49537	5	140208831 to 140208850	19	+	TSS region	transcription start site region 49537