Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:139929631-140132176

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Elfn1	5	139907943 to 139974722	66779	+	protein coding gene	leucine rich repeat and fibronectin type III, extracellular 1
Cpgi16914	5	139931981 to 139932155	174		CpG island	CpG island 16914
Cpgi16915	5	139957069 to 139957243	174		CpG island	CpG island 16915
Gm43704	5	139963296 to 139963791	495	-	pseudogene	predicted gene 43704
Cpgi16916	5	139972817 to 139973732	915		CpG island	CpG island 16916
Cpgi16917	5	140002281 to 140002749	468		CpG island	CpG island 16917
Mad1l1	5	140008689 to 140321552	312863	-	protein coding gene	MAD1 mitotic arrest deficient 1-like 1
Gm43702	5	140029631 to 140032176	2545	-	unclassified gene	predicted gene 43702
Tssr49536	5	140062461 to 140062468	7	+	TSS region	transcription start site region 49536
Gm16122	5	140074105 to 140085512	11407	+	antisense lncRNA gene	predicted gene 16122
Gm30492	5	140094719 to 140100186	5467	+	lncRNA gene	predicted gene, 30492
Gm16121	5	140101199 to 140107591	6392	+	antisense lncRNA gene	predicted gene 16121
Tssr54190	5	140105824 to 140105852	28	-	TSS region	transcription start site region 54190
Tssr54191	5	140118040 to 140118056	16	-	TSS region	transcription start site region 54191
Tssr54192	5	140118060 to 140118069	9	-	TSS region	transcription start site region 54192