Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:139740631-139810681

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ints1 5 139751282 to 139775674 24392 - protein coding gene integrator complex subunit 1
Cpgi16904 5 139754935 to 139755341 406 CpG island CpG island 16904
D5Dcr20 5 139766932 to 139767030 98 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 20
Mir7037 5 139767879 to 139767943 64 - miRNA gene microRNA 7037
Tssr54174 5 139771583 to 139771600 17 - TSS region transcription start site region 54174
Tssr54175 5 139771607 to 139771614 7 - TSS region transcription start site region 54175
Tssr54176 5 139774385 to 139774409 24 - TSS region transcription start site region 54176
Tssr54177 5 139774428 to 139774439 11 - TSS region transcription start site region 54177
Cpgi16905 5 139775131 to 139775857 726 CpG island CpG island 16905
Tssr54178 5 139775631 to 139775681 50 - TSS region transcription start site region 54178
Cpgi16906 5 139791071 to 139792271 1200 CpG island CpG island 16906
Tssr49526 5 139791508 to 139791517 9 + TSS region transcription start site region 49526
Tssr49527 5 139791522 to 139791539 17 + TSS region transcription start site region 49527
Mafk 5 139791536 to 139802653 11117 + protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
Tssr49528 5 139791556 to 139791601 45 + TSS region transcription start site region 49528
Tssr49529 5 139793994 to 139794005 11 + TSS region transcription start site region 49529
D5Dcr1 5 139794767 to 139794865 98 DNA segment DNA segment, Chr 5, Derry C. Roopenian 1
Tssr49530 5 139801012 to 139801017 5 + TSS region transcription start site region 49530
Tmem184a 5 139804952 to 139819971 15019 - protein coding gene transmembrane protein 184a
Cpgi16907 5 139807863 to 139808688 825 CpG island CpG island 16907
Gm26938 5 139807978 to 139826407 18429 - protein coding gene predicted gene, 26938
Tssr54179 5 139808501 to 139808525 24 - TSS region transcription start site region 54179