Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:139510909-139711153

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930500L23Rik	5	139523751 to 139541339	17588	+	lincRNA gene	RIKEN cDNA 4930500L23 gene
D5Mit284	5	139524691 to 139524893	202		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 284
Cpgi16885	5	139535369 to 139535830	461		CpG island	CpG island 16885
Cpgi16886	5	139540259 to 139541752	1493		CpG island	CpG island 16886
Cpgi16887	5	139543327 to 139545021	1694		CpG island	CpG island 16887
Tssr49517	5	139543862 to 139543871	9	+	TSS region	transcription start site region 49517
Tssr49518	5	139543889 to 139543904	15	+	TSS region	transcription start site region 49518
Uncx	5	139543898 to 139548179	4281	+	protein coding gene	UNC homeobox
Tssr49519	5	139543911 to 139543932	21	+	TSS region	transcription start site region 49519
Cpgi16888	5	139546302 to 139547958	1656		CpG island	CpG island 16888
Tssr1728	5	139547862 to 139547873	11	+	TSS region	transcription start site region 1728
Tssr49520	5	139547944 to 139547955	11	+	TSS region	transcription start site region 49520
Tssr49521	5	139547970 to 139547982	12	+	TSS region	transcription start site region 49521
Tssr49522	5	139547995 to 139548004	9	+	TSS region	transcription start site region 49522
Cpgi16889	5	139548345 to 139548948	603		CpG island	CpG island 16889
Cpgi16890	5	139551423 to 139551662	239		CpG island	CpG island 16890
Cpgi16891	5	139552705 to 139552881	176		CpG island	CpG island 16891
Cpgi16892	5	139553164 to 139553624	460		CpG island	CpG island 16892
Cpgi16893	5	139557552 to 139557964	412		CpG island	CpG island 16893
Cpgi16894	5	139558553 to 139558729	176		CpG island	CpG island 16894
Cpgi16895	5	139585311 to 139585832	521		CpG island	CpG island 16895
Cpgi16896	5	139599839 to 139600477	638		CpG island	CpG island 16896
Cpgi16897	5	139610909 to 139611153	244		CpG island	CpG island 16897
Cpgi16898	5	139619279 to 139620067	788		CpG island	CpG island 16898
Cpgi16899	5	139659339 to 139659647	308		CpG island	CpG island 16899
Gm46926	5	139660862 to 139669212	8350	-	lncRNA gene	predicted gene, 46926
Cpgi16900	5	139668487 to 139668912	425		CpG island	CpG island 16900
Cpgi16901	5	139687820 to 139687976	156		CpG island	CpG island 16901
Gm42424	5	139701647 to 139702022	375	+	pseudogene	predicted gene 42424
D5Dcr18	5	139702313 to 139702413	100		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 18
Micall2	5	139706696 to 139736336	29640	-	protein coding gene	MICAL-like 2