Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:139408599-139478705

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
3110082I17Rik 5 139359739 to 139460527 100788 - protein coding gene RIKEN cDNA 3110082I17 gene
C130050O18Rik 5 139405280 to 139415623 10343 + protein coding gene RIKEN cDNA C130050O18 gene
Gper1 5 139423151 to 139427800 4649 + protein coding gene G protein-coupled estrogen receptor 1
Cpgi16882 5 139423168 to 139423449 281 CpG island CpG island 16882
Tssr49512 5 139423172 to 139423186 14 + TSS region transcription start site region 49512
Tssr49513 5 139423191 to 139423202 11 + TSS region transcription start site region 49513
Gm26285 5 139443599 to 139443705 106 + snRNA gene predicted gene, 26285
D5Dcr17 5 139445283 to 139445378 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 17
Cpgi16883 5 139460167 to 139460841 674 CpG island CpG island 16883
Tssr54158 5 139460490 to 139460500 10 - TSS region transcription start site region 54158
Tssr54159 5 139460501 to 139460549 48 - TSS region transcription start site region 54159
Tssr54160 5 139460604 to 139460639 35 - TSS region transcription start site region 54160
Zfand2a 5 139471216 to 139484491 13275 - protein coding gene zinc finger, AN1-type domain 2A
Tssr49514 5 139473016 to 139473059 43 + TSS region transcription start site region 49514
Tssr54161 5 139473138 to 139473182 44 - TSS region transcription start site region 54161
Tssr54162 5 139473258 to 139473269 11 - TSS region transcription start site region 54162
Tssr54163 5 139478292 to 139478309 17 - TSS region transcription start site region 54163
Tssr54164 5 139478555 to 139478571 16 - TSS region transcription start site region 54164