Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:139332617-139377033

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cox19 5 139337822 to 139345166 7344 - protein coding gene cytochrome c oxidase assembly protein 19
Cpgi16879 5 139344930 to 139345404 474 CpG island CpG island 16879
Tssr54146 5 139345097 to 139345108 11 - TSS region transcription start site region 54146
Tssr54147 5 139345112 to 139345148 36 - TSS region transcription start site region 54147
Tssr54148 5 139345149 to 139345216 67 - TSS region transcription start site region 54148
Tssr49499 5 139352607 to 139352623 16 + TSS region transcription start site region 49499
Cyp2w1 5 139352617 to 139357033 4416 + protein coding gene cytochrome P450, family 2, subfamily w, polypeptide 1
Tssr49500 5 139354209 to 139354222 13 + TSS region transcription start site region 49500
Tssr49501 5 139354241 to 139354260 19 + TSS region transcription start site region 49501
3110082I17Rik 5 139359739 to 139460527 100788 - protein coding gene RIKEN cDNA 3110082I17 gene
Tssr49502 5 139364964 to 139364996 32 + TSS region transcription start site region 49502
Mir339 5 139369650 to 139369745 95 - miRNA gene microRNA 339
Cpgi16880 5 139371854 to 139372493 639 CpG island CpG island 16880
Tssr54149 5 139372177 to 139372201 24 - TSS region transcription start site region 54149
Tssr54150 5 139372213 to 139372242 29 - TSS region transcription start site region 54150
Tssr1727 5 139372243 to 139372256 13 - TSS region transcription start site region 1727