Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138803046-138970604

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam20c 5 138754514 to 138810077 55563 + protein coding gene family with sequence similarity 20, member C
Tssr49475 5 138804711 to 138804742 31 + TSS region transcription start site region 49475
Tssr49476 5 138807247 to 138807265 18 + TSS region transcription start site region 49476
Tssr49477 5 138808852 to 138808872 20 + TSS region transcription start site region 49477
Tssr49478 5 138809578 to 138809597 19 + TSS region transcription start site region 49478
Tssr49479 5 138809845 to 138809890 45 + TSS region transcription start site region 49479
Tssr54108 5 138810041 to 138810071 30 - TSS region transcription start site region 54108
Cpgi16868 5 138819952 to 138820290 338 CpG island CpG island 16868
Gm5294 5 138820080 to 138821619 1539 + protein coding gene predicted gene 5294
Cpgi16869 5 138820741 to 138821588 847 CpG island CpG island 16869
Tssr49480 5 138820963 to 138820968 5 + TSS region transcription start site region 49480
Gm30206 5 138823811 to 138825226 1415 - lncRNA gene predicted gene, 30206
Tssr1726 5 138847035 to 138847060 25 + TSS region transcription start site region 1726
Gm31891 5 138863046 to 138910604 47558 + pseudogene predicted gene, 31891
Cpgi16870 5 138894474 to 138894786 312 CpG island CpG island 16870
Gm38726 5 138934588 to 138945163 10575 + lncRNA gene predicted gene, 38726