Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138399813-138610779

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa26 5 104435822 to 138557193 34121371 QTL B.burgdorferi-associated arthritis 26
Cia14 5 113172519 to 138557193 25384674 QTL collagen induced arthritis QTL 14
Gm48029 5 138412594 to 138412913 319 - pseudogene predicted gene, 48029
Cpgi16864 5 138441343 to 138441966 623 CpG island CpG island 16864
Zfp157 5 138441468 to 138460694 19226 + protein coding gene zinc finger protein 157
Tssr49448 5 138441471 to 138441530 59 + TSS region transcription start site region 49448
Rvfs3 5 138457140 to 26236236 -112220904 QTL Rift Valley fever susceptibility 3
Scram1 5 138457140 to 138457140 0 QTL spinal cord resistance to astrocytoma modifier 1
Gm5564 5 138504813 to 138505779 966 + pseudogene predicted gene 5564
Vmn2r-ps24 5 138532077 to 138532934 857 + pseudogene vomeronasal 2, receptor, pseudogene 24
D5Mit31 5 138556974 to 138557193 219 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 31
Bpq4 5 138556974 to 138557193 219 QTL blood pressure QTL 4
D5Dcr15 5 138557082 to 138557187 105 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 15
1700123K08Rik 5 138561840 to 138564712 2872 - protein coding gene RIKEN cDNA 1700123K08 gene
Tssr54100 5 138564671 to 138564707 36 - TSS region transcription start site region 54100
Zfp68 5 138603652 to 138619743 16091 - protein coding gene zinc finger protein 68
Gm24082 5 138606699 to 138606781 82 + miRNA gene predicted gene, 24082
Tssr49449 5 138610699 to 138610709 10 + TSS region transcription start site region 49449
Gm15497 5 138610739 to 138611289 550 + pseudogene predicted gene 15497