Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138291961-138393557

11 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stag3	5	138280240 to 138312393	32153	+	protein coding gene	stromal antigen 3
Tssr49446	5	138341923 to 138341936	13	+	TSS region	transcription start site region 49446
Tssr49447	5	138341941 to 138341975	34	+	TSS region	transcription start site region 49447
Pvrig	5	138341961 to 138343557	1596	+	protein coding gene	poliovirus receptor related immunoglobulin domain containing
Pvrig-ps	5	138359838 to 138360041	203	+	pseudogene	poliovirus receptor related immunoglobulin domain containing, pseudogene
Gm10874	5	138363719 to 138388287	24568	+	lincRNA gene	predicted gene 10874
Got2-ps1	5	138364260 to 138365552	1292	-	pseudogene	glutamatic-oxaloacetic transaminase 2, mitochondrial, pseudogene 1
Cpgi16863	5	138364680 to 138364903	223		CpG island	CpG island 16863
Tssr54099	5	138365608 to 138365610	2	-	TSS region	transcription start site region 54099
Gm25525	5	138378591 to 138378697	106	+	snRNA gene	predicted gene, 25525
Cyp3a61-ps1	5	138383812 to 138391594	7782	-	pseudogene	cytochrome P450, family 3, subfamily a, member 61, pseudogene 1