Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138178148-138258251

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ap4m1 5 138172021 to 138180429 8408 + protein coding gene adaptor-related protein complex AP-4, mu 1
Taf6 5 138178617 to 138187446 8829 - protein coding gene TATA-box binding protein associated factor 6
Tssr49422 5 138180146 to 138180150 4 + TSS region transcription start site region 49422
Tssr54082 5 138184711 to 138184722 11 - TSS region transcription start site region 54082
Cpgi16857 5 138186938 to 138187291 353 CpG island CpG island 16857
Tssr54083 5 138187177 to 138187237 60 - TSS region transcription start site region 54083
Tssr54084 5 138187417 to 138187463 46 - TSS region transcription start site region 54084
Tssr49423 5 138187443 to 138187462 19 + TSS region transcription start site region 49423
Tssr49424 5 138187499 to 138187521 22 + TSS region transcription start site region 49424
Tssr49425 5 138187523 to 138187566 43 + TSS region transcription start site region 49425
Cnpy4 5 138187535 to 138193894 6359 + protein coding gene canopy FGF signaling regulator 4
Cpgi16858 5 138194181 to 138195273 1092 CpG island CpG island 16858
Tssr49426 5 138194277 to 138194326 49 + TSS region transcription start site region 49426
Mblac1 5 138194314 to 138195621 1307 + protein coding gene metallo-beta-lactamase domain containing 1
Tssr54085 5 138195545 to 138195552 7 - TSS region transcription start site region 54085
Tssr54086 5 138195633 to 138195658 25 - TSS region transcription start site region 54086
Gm454 5 138203609 to 138207308 3699 - lincRNA gene predicted gene 454
Tssr54087 5 138207269 to 138207301 32 - TSS region transcription start site region 54087
Tssr54088 5 138207302 to 138207317 15 - TSS region transcription start site region 54088
Gm43645 5 138207508 to 138207972 464 + lincRNA gene predicted gene 43645
D5Mit98 5 138218095 to 138218250 155 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 98
D5Dcr14 5 138218148 to 138218251 103 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 14
Tssr49427 5 138219733 to 138219740 7 + TSS region transcription start site region 49427
Gm22956 5 138219737 to 138219816 79 + snRNA gene predicted gene, 22956
Nxpe5 5 138225898 to 138253363 27465 + protein coding gene neurexophilin and PC-esterase domain family, member 5
Tssr54089 5 138227380 to 138227418 38 - TSS region transcription start site region 54089
Tssr49428 5 138229739 to 138229749 10 + TSS region transcription start site region 49428
Tssr49429 5 138229768 to 138229779 11 + TSS region transcription start site region 49429
Tssr49430 5 138229786 to 138229795 9 + TSS region transcription start site region 49430
Tssr49431 5 138229812 to 138229819 7 + TSS region transcription start site region 49431
Tssr49432 5 138229834 to 138229849 15 + TSS region transcription start site region 49432
Tssr49433 5 138229867 to 138229881 14 + TSS region transcription start site region 49433
Tssr1725 5 138231043 to 138231076 33 + TSS region transcription start site region 1725
Cpgi16859 5 138255480 to 138256019 539 CpG island CpG island 16859
Lamtor4 5 138255482 to 138259395 3913 + protein coding gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
Tssr54090 5 138255542 to 138255600 58 - TSS region transcription start site region 54090
Tssr49434 5 138255714 to 138255725 11 + TSS region transcription start site region 49434
Tssr49435 5 138255727 to 138255788 61 + TSS region transcription start site region 49435
Tssr49436 5 138255855 to 138255866 11 + TSS region transcription start site region 49436
Tssr49437 5 138256067 to 138256123 56 + TSS region transcription start site region 49437
Tssr49438 5 138256124 to 138256135 11 + TSS region transcription start site region 49438