Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138162021-138190429

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cops6 5 138161102 to 138163984 2882 + protein coding gene COP9 signalosome subunit 6
Tssr49417 5 138162182 to 138162191 9 + TSS region transcription start site region 49417
Mcm7 5 138164589 to 138171883 7294 - protein coding gene minichromosome maintenance complex component 7
Mir25 5 138165321 to 138165404 83 - miRNA gene microRNA 25
Mirc3 5 138165321 to 138165818 497 complex/cluster/region microRNA cluster 3, including Mir25 through Mir106b
Mir93 5 138165523 to 138165610 87 - miRNA gene microRNA 93
Mir106b 5 138165737 to 138165818 81 - miRNA gene microRNA 106b
Cpgi16856 5 138170882 to 138172419 1537 CpG island CpG island 16856
Tssr1724 5 138170974 to 138170986 12 - TSS region transcription start site region 1724
Tssr54074 5 138170992 to 138171033 41 - TSS region transcription start site region 54074
Tssr54075 5 138171216 to 138171246 30 - TSS region transcription start site region 54075
Tssr54076 5 138171248 to 138171274 26 - TSS region transcription start site region 54076
Tssr49418 5 138171337 to 138171402 65 + TSS region transcription start site region 49418
Tssr54077 5 138171813 to 138171816 3 - TSS region transcription start site region 54077
Tssr54078 5 138171822 to 138171833 11 - TSS region transcription start site region 54078
Tssr54079 5 138171844 to 138171887 43 - TSS region transcription start site region 54079
Tssr49419 5 138171997 to 138172021 24 + TSS region transcription start site region 49419
Ap4m1 5 138172021 to 138180429 8408 + protein coding gene adaptor-related protein complex AP-4, mu 1
Tssr49420 5 138172110 to 138172132 22 + TSS region transcription start site region 49420
Tssr49421 5 138172141 to 138172188 47 + TSS region transcription start site region 49421
Tssr54080 5 138172358 to 138172365 7 - TSS region transcription start site region 54080
Tssr54081 5 138172383 to 138172418 35 - TSS region transcription start site region 54081
Taf6 5 138178617 to 138187446 8829 - protein coding gene TATA-box binding protein associated factor 6
Tssr49422 5 138180146 to 138180150 4 + TSS region transcription start site region 49422
Tssr54082 5 138184711 to 138184722 11 - TSS region transcription start site region 54082
Cpgi16857 5 138186938 to 138187291 353 CpG island CpG island 16857
Tssr54083 5 138187177 to 138187237 60 - TSS region transcription start site region 54083
Tssr54084 5 138187417 to 138187463 46 - TSS region transcription start site region 54084
Tssr49423 5 138187443 to 138187462 19 + TSS region transcription start site region 49423
Tssr49424 5 138187499 to 138187521 22 + TSS region transcription start site region 49424
Tssr49425 5 138187523 to 138187566 43 + TSS region transcription start site region 49425
Cnpy4 5 138187535 to 138193894 6359 + protein coding gene canopy FGF signaling regulator 4