Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pilra | 5 | 14326 | - | protein coding gene | paired immunoglobin-like type 2 receptor alpha | |
Tssr1721 | 5 | 13 | - | TSS region | transcription start site region 1721 | |
Tssr54052 | 5 | 9 | - | TSS region | transcription start site region 54052 | |
Tssr54053 | 5 | 23 | - | TSS region | transcription start site region 54053 | |
Pilrb1 | 5 | 5959 | - | protein coding gene | paired immunoglobin-like type 2 receptor beta 1 | |
Gm36551 | 5 | 3273 | + | antisense lncRNA gene | predicted gene, 36551 | |
Tssr49395 | 5 | 11 | + | TSS region | transcription start site region 49395 | |
Tssr49396 | 5 | 22 | + | TSS region | transcription start site region 49396 | |
Tssr54054 | 5 | 20 | - | TSS region | transcription start site region 54054 | |
Pilrb2 | 5 | 5988 | - | protein coding gene | paired immunoglobin-like type 2 receptor beta 2 | |
Gm43495 | 5 | 455 | + | antisense lncRNA gene | predicted gene 43495 | |
Tssr54055 | 5 | 5 | - | TSS region | transcription start site region 54055 | |
Tssr54056 | 5 | 29 | - | TSS region | transcription start site region 54056 | |
Tssr54057 | 5 | 11 | - | TSS region | transcription start site region 54057 | |
Gm43494 | 5 | 387 | - | pseudogene | predicted gene 43494 | |
Tssr49397 | 5 | 23 | + | TSS region | transcription start site region 49397 | |
Tssr49398 | 5 | 10 | + | TSS region | transcription start site region 49398 | |
Tssr49399 | 5 | 1 | + | TSS region | transcription start site region 49399 | |
Tssr49400 | 5 | 19 | + | TSS region | transcription start site region 49400 | |
Gm3103 | 5 | 751 | + | pseudogene | predicted gene 3103 | |
Cyp3a13 | 5 | 28686 | - | protein coding gene | cytochrome P450, family 3, subfamily a, polypeptide 13 | |
Tssr54058 | 5 | 18 | - | TSS region | transcription start site region 54058 | |
Gm15502 | 5 | 207 | - | pseudogene | predicted gene 15502 | |
Tssr54059 | 5 | 5 | - | TSS region | transcription start site region 54059 | |
Tssr54060 | 5 | 16 | - | TSS region | transcription start site region 54060 | |
Gm8099 | 5 | 741 | + | pseudogene | predicted gene 8099 | |
Tssr49401 | 5 | 13 | + | TSS region | transcription start site region 49401 | |
Tssr49402 | 5 | 14 | + | TSS region | transcription start site region 49402 | |
Gjc3 | 5 | 9637 | - | protein coding gene | gap junction protein, gamma 3 | |
D5Mit221 | 5 | 145 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 221 | ||
Tssr54061 | 5 | 11 | - | TSS region | transcription start site region 54061 | |
Tssr54062 | 5 | 20 | - | TSS region | transcription start site region 54062 | |
Tssr54063 | 5 | 5 | - | TSS region | transcription start site region 54063 | |
Tssr54064 | 5 | 12 | - | TSS region | transcription start site region 54064 | |
Tssr54065 | 5 | 9 | - | TSS region | transcription start site region 54065 | |
Tssr54066 | 5 | 11 | - | TSS region | transcription start site region 54066 | |
Tssr54067 | 5 | 14 | - | TSS region | transcription start site region 54067 | |
Tssr54068 | 5 | 11 | - | TSS region | transcription start site region 54068 | |
Tssr54069 | 5 | 22 | - | TSS region | transcription start site region 54069 | |
Tssr54070 | 5 | 3 | - | TSS region | transcription start site region 54070 | |
Tssr1722 | 5 | 10 | + | TSS region | transcription start site region 1722 | |
Tssr49403 | 5 | 44 | + | TSS region | transcription start site region 49403 | |
Azgp1 | 5 | 8712 | + | protein coding gene | alpha-2-glycoprotein 1, zinc | |
Tssr1723 | 5 | 9 | + | TSS region | transcription start site region 1723 | |
Tssr49404 | 5 | 8 | + | TSS region | transcription start site region 49404 | |
Tssr49405 | 5 | 12 | + | TSS region | transcription start site region 49405 | |
Tssr49406 | 5 | 9 | + | TSS region | transcription start site region 49406 | |
Tssr49407 | 5 | 9 | + | TSS region | transcription start site region 49407 | |
Tssr54071 | 5 | 22 | - | TSS region | transcription start site region 54071 | |
Gm4963 | 5 | 377 | - | pseudogene | predicted gene 4963 | |
Gm29127 | 5 | 516 | + | pseudogene | predicted gene 29127 | |
Smok3a | 5 | 13389 | + | protein coding gene | sperm motility kinase 3A | |
Smok3b | 5 | 13409 | + | protein coding gene | sperm motility kinase 3B | |
Smok3c | 5 | 13343 | + | protein coding gene | sperm motility kinase 3C | |
Cpgi16852 | 5 | 659 | CpG island | CpG island 16852 | ||
Tssr49408 | 5 | 64 | + | TSS region | transcription start site region 49408 | |
Zkscan1 | 5 | 22738 | + | protein coding gene | zinc finger with KRAB and SCAN domains 1 | |
Tssr49409 | 5 | 9 | + | TSS region | transcription start site region 49409 | |
Tssr49410 | 5 | 12 | + | TSS region | transcription start site region 49410 | |
Tssr49411 | 5 | 1 | + | TSS region | transcription start site region 49411 | |
Tssr49412 | 5 | 4 | + | TSS region | transcription start site region 49412 | |
Gm43493 | 5 | 201 | + | pseudogene | predicted gene 43493 | |
Cpgi16853 | 5 | 496 | CpG island | CpG island 16853 | ||
Tssr54072 | 5 | 17 | - | TSS region | transcription start site region 54072 | |
Zscan21 | 5 | 17362 | + | protein coding gene | zinc finger and SCAN domain containing 21 | |
Tssr49413 | 5 | 75 | + | TSS region | transcription start site region 49413 | |
Zfp113 | 5 | 16042 | - | protein coding gene | zinc finger protein 113 | |
Cpgi16854 | 5 | 699 | CpG island | CpG island 16854 | ||
Tssr54073 | 5 | 46 | - | TSS region | transcription start site region 54073 | |
Cpgi16855 | 5 | 723 | CpG island | CpG island 16855 | ||
Tssr49414 | 5 | 33 | + | TSS region | transcription start site region 49414 | |
Cops6 | 5 | 2882 | + | protein coding gene | COP9 signalosome subunit 6 | |
Tssr49415 | 5 | 13 | + | TSS region | transcription start site region 49415 | |
Tssr49416 | 5 | 14 | + | TSS region | transcription start site region 49416 | |
Tssr49417 | 5 | 9 | + | TSS region | transcription start site region 49417 | |
Mcm7 | 5 | 7294 | - | protein coding gene | minichromosome maintenance complex component 7 | |
Mirc3 | 5 | 497 | complex/cluster/region | microRNA cluster 3, including Mir25 through Mir106b | ||
Mir25 | 5 | 83 | - | miRNA gene | microRNA 25 | |
Mir93 | 5 | 87 | - | miRNA gene | microRNA 93 | |
Mir106b | 5 | 81 | - | miRNA gene | microRNA 106b | |
Cpgi16856 | 5 | 1537 | CpG island | CpG island 16856 | ||
Tssr1724 | 5 | 12 | - | TSS region | transcription start site region 1724 | |
Tssr54074 | 5 | 41 | - | TSS region | transcription start site region 54074 | |
Tssr54075 | 5 | 30 | - | TSS region | transcription start site region 54075 | |
Tssr54076 | 5 | 26 | - | TSS region | transcription start site region 54076 | |
Tssr49418 | 5 | 65 | + | TSS region | transcription start site region 49418 | |
Tssr54077 | 5 | 3 | - | TSS region | transcription start site region 54077 | |
Tssr54078 | 5 | 11 | - | TSS region | transcription start site region 54078 | |
Tssr54079 | 5 | 43 | - | TSS region | transcription start site region 54079 | |
Tssr49419 | 5 | 24 | + | TSS region | transcription start site region 49419 | |
Ap4m1 | 5 | 8408 | + | protein coding gene | adaptor-related protein complex AP-4, mu 1 | |
Tssr49420 | 5 | 22 | + | TSS region | transcription start site region 49420 | |
Tssr49421 | 5 | 47 | + | TSS region | transcription start site region 49421 | |
Tssr54080 | 5 | 7 | - | TSS region | transcription start site region 54080 | |
Tssr54081 | 5 | 35 | - | TSS region | transcription start site region 54081 | |
Taf6 | 5 | 8829 | - | protein coding gene | TATA-box binding protein associated factor 6 | |
Tssr49422 | 5 | 4 | + | TSS region | transcription start site region 49422 | |
Tssr54082 | 5 | 11 | - | TSS region | transcription start site region 54082 | |
Cpgi16857 | 5 | 353 | CpG island | CpG island 16857 | ||
Tssr54083 | 5 | 60 | - | TSS region | transcription start site region 54083 | |
Tssr54084 | 5 | 46 | - | TSS region | transcription start site region 54084 | |
Tssr49423 | 5 | 19 | + | TSS region | transcription start site region 49423 | |
Tssr49424 | 5 | 22 | + | TSS region | transcription start site region 49424 | |
Tssr49425 | 5 | 43 | + | TSS region | transcription start site region 49425 | |
Cnpy4 | 5 | 6359 | + | protein coding gene | canopy FGF signaling regulator 4 | |
Cpgi16858 | 5 | 1092 | CpG island | CpG island 16858 | ||
Tssr49426 | 5 | 49 | + | TSS region | transcription start site region 49426 | |
Mblac1 | 5 | 1307 | + | protein coding gene | metallo-beta-lactamase domain containing 1 | |
Tssr54085 | 5 | 7 | - | TSS region | transcription start site region 54085 | |
Tssr54086 | 5 | 25 | - | TSS region | transcription start site region 54086 | |
Gm454 | 5 | 3699 | - | lincRNA gene | predicted gene 454 | |
Tssr54087 | 5 | 32 | - | TSS region | transcription start site region 54087 | |
Tssr54088 | 5 | 15 | - | TSS region | transcription start site region 54088 | |
Gm43645 | 5 | 464 | + | lincRNA gene | predicted gene 43645 | |
D5Mit98 | 5 | 155 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 98 | ||
D5Dcr14 | 5 | 103 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 14 | ||
Tssr49427 | 5 | 7 | + | TSS region | transcription start site region 49427 | |
Gm22956 | 5 | 79 | + | snRNA gene | predicted gene, 22956 | |
Nxpe5 | 5 | 27465 | + | protein coding gene | neurexophilin and PC-esterase domain family, member 5 | |
Tssr54089 | 5 | 38 | - | TSS region | transcription start site region 54089 | |
Tssr49428 | 5 | 10 | + | TSS region | transcription start site region 49428 | |
Tssr49429 | 5 | 11 | + | TSS region | transcription start site region 49429 | |
Tssr49430 | 5 | 9 | + | TSS region | transcription start site region 49430 | |
Tssr49431 | 5 | 7 | + | TSS region | transcription start site region 49431 | |
Tssr49432 | 5 | 15 | + | TSS region | transcription start site region 49432 | |
Tssr49433 | 5 | 14 | + | TSS region | transcription start site region 49433 | |
Tssr1725 | 5 | 33 | + | TSS region | transcription start site region 1725 | |
Cpgi16859 | 5 | 539 | CpG island | CpG island 16859 | ||
Lamtor4 | 5 | 3913 | + | protein coding gene | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | |
Tssr54090 | 5 | 58 | - | TSS region | transcription start site region 54090 | |
Tssr49434 | 5 | 11 | + | TSS region | transcription start site region 49434 | |
Tssr49435 | 5 | 61 | + | TSS region | transcription start site region 49435 | |
Tssr49436 | 5 | 11 | + | TSS region | transcription start site region 49436 | |
Tssr49437 | 5 | 56 | + | TSS region | transcription start site region 49437 | |
Tssr49438 | 5 | 11 | + | TSS region | transcription start site region 49438 | |
Map11 | 5 | 4377 | - | protein coding gene | microtubule associated protein 11 | |
Tssr49439 | 5 | 22 | + | TSS region | transcription start site region 49439 | |
Tssr49440 | 5 | 21 | + | TSS region | transcription start site region 49440 | |
Cpgi16860 | 5 | 1250 | CpG island | CpG island 16860 | ||
Tssr54091 | 5 | 16 | - | TSS region | transcription start site region 54091 | |
Tssr54092 | 5 | 46 | - | TSS region | transcription start site region 54092 | |
Tssr54093 | 5 | 47 | - | TSS region | transcription start site region 54093 | |
6330418K02Rik | 5 | 2616 | + | antisense lncRNA gene | RIKEN cDNA 6330418K02 gene | |
Tssr49441 | 5 | 40 | + | TSS region | transcription start site region 49441 | |
Tssr54094 | 5 | 25 | - | TSS region | transcription start site region 54094 | |
Gal3st4 | 5 | 7919 | - | protein coding gene | galactose-3-O-sulfotransferase 4 | |
Gm43720 | 5 | 15006 | - | protein coding gene | predicted gene 43720 | |
Tssr54095 | 5 | 15 | - | TSS region | transcription start site region 54095 | |
Tssr54096 | 5 | 10 | - | TSS region | transcription start site region 54096 | |
Tssr54097 | 5 | 31 | - | TSS region | transcription start site region 54097 | |
Gpc2 | 5 | 6350 | - | protein coding gene | glypican 2 (cerebroglycan) | |
Cpgi16861 | 5 | 585 | CpG island | CpG island 16861 | ||
Cpgi16862 | 5 | 1116 | CpG island | CpG island 16862 | ||
Tssr54098 | 5 | 56 | - | TSS region | transcription start site region 54098 | |
Stag3 | 5 | 32153 | + | protein coding gene | stromal antigen 3 | |
Tssr49442 | 5 | 18 | + | TSS region | transcription start site region 49442 | |
Tssr49443 | 5 | 12 | + | TSS region | transcription start site region 49443 | |
Tssr49444 | 5 | 21 | + | TSS region | transcription start site region 49444 | |
Tssr49445 | 5 | 25 | + | TSS region | transcription start site region 49445 | |
Tssr49446 | 5 | 13 | + | TSS region | transcription start site region 49446 | |
Tssr49447 | 5 | 34 | + | TSS region | transcription start site region 49447 | |
Pvrig | 5 | 1596 | + | protein coding gene | poliovirus receptor related immunoglobulin domain containing | |
Pvrig-ps | 5 | 203 | + | pseudogene | poliovirus receptor related immunoglobulin domain containing, pseudogene | |
Gm10874 | 5 | 24568 | + | lincRNA gene | predicted gene 10874 | |
Got2-ps1 | 5 | 1292 | - | pseudogene | glutamatic-oxaloacetic transaminase 2, mitochondrial, pseudogene 1 | |
Cpgi16863 | 5 | 223 | CpG island | CpG island 16863 | ||
Tssr54099 | 5 | 2 | - | TSS region | transcription start site region 54099 | |
Gm25525 | 5 | 106 | + | snRNA gene | predicted gene, 25525 | |
Cyp3a61-ps1 | 5 | 7782 | - | pseudogene | cytochrome P450, family 3, subfamily a, member 61, pseudogene 1 | |
Gm48029 | 5 | 319 | - | pseudogene | predicted gene, 48029 | |
Cpgi16864 | 5 | 623 | CpG island | CpG island 16864 | ||
Zfp157 | 5 | 19226 | + | protein coding gene | zinc finger protein 157 | |
Tssr49448 | 5 | 59 | + | TSS region | transcription start site region 49448 | |
Scram1 | 5 | 0 | QTL | spinal cord resistance to astrocytoma modifier 1 | ||
Rvfs3 | 5 | -112220904 | QTL | Rift Valley fever susceptibility 3 | ||
Gm5564 | 5 | 966 | + | pseudogene | predicted gene 5564 |