Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137787994-137988013

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16851 5 137785035 to 137788664 3629 CpG island CpG island 16851
Zcwpw1 5 137787798 to 137822621 34823 + protein coding gene zinc finger, CW type with PWWP domain 1
Pilra 5 137821952 to 137836278 14326 - protein coding gene paired immunoglobin-like type 2 receptor alpha
Tssr54047 5 137827809 to 137827820 11 - TSS region transcription start site region 54047
Tssr54048 5 137827839 to 137827847 8 - TSS region transcription start site region 54048
Tssr54049 5 137831206 to 137831225 19 - TSS region transcription start site region 54049
Tssr49394 5 137831229 to 137831244 15 + TSS region transcription start site region 49394
Tssr54050 5 137831238 to 137831245 7 - TSS region transcription start site region 54050
Tssr54051 5 137831273 to 137831282 9 - TSS region transcription start site region 54051
Tssr1721 5 137831408 to 137831421 13 - TSS region transcription start site region 1721
Tssr54052 5 137836184 to 137836193 9 - TSS region transcription start site region 54052
Tssr54053 5 137836210 to 137836233 23 - TSS region transcription start site region 54053
Pilrb1 5 137852147 to 137858106 5959 - protein coding gene paired immunoglobin-like type 2 receptor beta 1
Gm36551 5 137857045 to 137860318 3273 + antisense lncRNA gene predicted gene, 36551
Tssr49395 5 137857189 to 137857200 11 + TSS region transcription start site region 49395
Tssr49396 5 137857218 to 137857240 22 + TSS region transcription start site region 49396
Tssr54054 5 137858034 to 137858054 20 - TSS region transcription start site region 54054
Pilrb2 5 137865827 to 137871815 5988 - protein coding gene paired immunoglobin-like type 2 receptor beta 2
Gm43495 5 137870754 to 137871209 455 + antisense lncRNA gene predicted gene 43495
Tssr54055 5 137871729 to 137871734 5 - TSS region transcription start site region 54055
Tssr54056 5 137871739 to 137871768 29 - TSS region transcription start site region 54056
Tssr54057 5 137871779 to 137871790 11 - TSS region transcription start site region 54057
Gm43494 5 137875235 to 137875622 387 - pseudogene predicted gene 43494
Tssr49397 5 137883100 to 137883123 23 + TSS region transcription start site region 49397
Tssr49398 5 137887920 to 137887930 10 + TSS region transcription start site region 49398
Tssr49399 5 137887962 to 137887963 1 + TSS region transcription start site region 49399
Tssr49400 5 137887994 to 137888013 19 + TSS region transcription start site region 49400
Gm3103 5 137888071 to 137888822 751 + pseudogene predicted gene 3103
Cyp3a13 5 137892933 to 137921619 28686 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 13
Tssr54058 5 137893623 to 137893641 18 - TSS region transcription start site region 54058
Gm15502 5 137896752 to 137896959 207 - pseudogene predicted gene 15502
Tssr54059 5 137897955 to 137897960 5 - TSS region transcription start site region 54059
Tssr54060 5 137921612 to 137921628 16 - TSS region transcription start site region 54060
Gm8099 5 137928275 to 137929016 741 + pseudogene predicted gene 8099
Tssr49401 5 137928294 to 137928307 13 + TSS region transcription start site region 49401
Tssr49402 5 137928670 to 137928684 14 + TSS region transcription start site region 49402
Gjc3 5 137953461 to 137963098 9637 - protein coding gene gap junction protein, gamma 3
D5Mit221 5 137956159 to 137956304 145 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 221
Tssr54061 5 137956345 to 137956356 11 - TSS region transcription start site region 54061
Tssr54062 5 137962911 to 137962931 20 - TSS region transcription start site region 54062
Tssr54063 5 137962933 to 137962938 5 - TSS region transcription start site region 54063
Tssr54064 5 137962955 to 137962967 12 - TSS region transcription start site region 54064
Tssr54065 5 137962975 to 137962984 9 - TSS region transcription start site region 54065
Tssr54066 5 137963029 to 137963040 11 - TSS region transcription start site region 54066
Tssr54067 5 137963042 to 137963056 14 - TSS region transcription start site region 54067
Tssr54068 5 137963062 to 137963073 11 - TSS region transcription start site region 54068
Tssr54069 5 137963087 to 137963109 22 - TSS region transcription start site region 54069
Tssr54070 5 137963135 to 137963138 3 - TSS region transcription start site region 54070
Tssr1722 5 137981489 to 137981499 10 + TSS region transcription start site region 1722
Tssr49403 5 137981512 to 137981556 44 + TSS region transcription start site region 49403
Azgp1 5 137981521 to 137990233 8712 + protein coding gene alpha-2-glycoprotein 1, zinc
Tssr1723 5 137981560 to 137981569 9 + TSS region transcription start site region 1723
Tssr49404 5 137985382 to 137985390 8 + TSS region transcription start site region 49404