Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137662071-137752082

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Agfg2 5 137650463 to 137684726 34263 - protein coding gene ArfGAP with FG repeats 2
Tssr54022 5 137669571 to 137669575 4 - TSS region transcription start site region 54022
Cpgi16847 5 137683940 to 137685119 1179 CpG island CpG island 16847
Tssr54023 5 137684588 to 137684603 15 - TSS region transcription start site region 54023
Tssr54024 5 137684665 to 137684729 64 - TSS region transcription start site region 54024
Tssr54025 5 137684747 to 137684757 10 - TSS region transcription start site region 54025
Gm15498 5 137685154 to 137690751 5597 - lincRNA gene predicted gene 15498
D5Mit340 5 137685313 to 137685437 124 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 340
Tssr49365 5 137705343 to 137705390 47 + TSS region transcription start site region 49365
Tssr54026 5 137707044 to 137707055 11 - TSS region transcription start site region 54026
Tssr54027 5 137707071 to 137707082 11 - TSS region transcription start site region 54027
Gm36403 5 137707125 to 137719627 12502 + lncRNA gene predicted gene, 36403
Gm15753 5 137720354 to 137721740 1386 - pseudogene predicted gene 15753
Tssr54028 5 137720695 to 137720710 15 - TSS region transcription start site region 54028
Tssr54029 5 137720759 to 137720789 30 - TSS region transcription start site region 54029
Tssr54030 5 137720844 to 137720848 4 - TSS region transcription start site region 54030
Nyap1 5 137730882 to 137741607 10725 - protein coding gene neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
Cpgi16848 5 137740918 to 137741997 1079 CpG island CpG island 16848
Tssr54031 5 137741046 to 137741062 16 - TSS region transcription start site region 54031
Tssr54032 5 137741109 to 137741185 76 - TSS region transcription start site region 54032
Tssr54033 5 137741359 to 137741370 11 - TSS region transcription start site region 54033
Tssr54034 5 137741415 to 137741454 39 - TSS region transcription start site region 54034
Tssr54035 5 137741601 to 137741617 16 - TSS region transcription start site region 54035
Tssr49366 5 137745751 to 137745797 46 + TSS region transcription start site region 49366
Tssr49367 5 137745953 to 137745964 11 + TSS region transcription start site region 49367
Tssr49368 5 137745967 to 137746027 60 + TSS region transcription start site region 49368
Tsc22d4 5 137745969 to 137768453 22484 + protein coding gene TSC22 domain family, member 4
Cpgi16849 5 137746007 to 137746487 480 CpG island CpG island 16849
Tssr49369 5 137746113 to 137746178 65 + TSS region transcription start site region 49369
Tssr49370 5 137746183 to 137746194 11 + TSS region transcription start site region 49370
Tssr49371 5 137746238 to 137746249 11 + TSS region transcription start site region 49371
Tssr49372 5 137746355 to 137746374 19 + TSS region transcription start site region 49372
Tssr49373 5 137746547 to 137746617 70 + TSS region transcription start site region 49373
Tssr49374 5 137746639 to 137746651 12 + TSS region transcription start site region 49374
Tssr49375 5 137746690 to 137746701 11 + TSS region transcription start site region 49375
Tssr49376 5 137746885 to 137746917 32 + TSS region transcription start site region 49376
Tssr49377 5 137746952 to 137746975 23 + TSS region transcription start site region 49377
Tssr49378 5 137747066 to 137747089 23 + TSS region transcription start site region 49378
Tssr49379 5 137747511 to 137747533 22 + TSS region transcription start site region 49379
Tssr49380 5 137747608 to 137747642 34 + TSS region transcription start site region 49380
Tssr49381 5 137747643 to 137747684 41 + TSS region transcription start site region 49381
Tssr49382 5 137747714 to 137747734 20 + TSS region transcription start site region 49382
Tssr54036 5 137747985 to 137747990 5 - TSS region transcription start site region 54036
Tssr49383 5 137748966 to 137748970 4 + TSS region transcription start site region 49383