Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137610695-137680720

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcolce 5 137605105 to 137611764 6659 - protein coding gene procollagen C-endopeptidase enhancer protein
Tssr54010 5 137611337 to 137611348 11 - TSS region transcription start site region 54010
Tssr54011 5 137611372 to 137611428 56 - TSS region transcription start site region 54011
Tssr54012 5 137611429 to 137611442 13 - TSS region transcription start site region 54012
Fbxo24 5 137612505 to 137625078 12573 - protein coding gene F-box protein 24
Gm36266 5 137612852 to 137615247 2395 + antisense lncRNA gene predicted gene, 36266
Tssr54013 5 137613759 to 137613785 26 - TSS region transcription start site region 54013
Tssr49351 5 137615610 to 137615621 11 + TSS region transcription start site region 49351
Gm16089 5 137615627 to 137615962 335 + pseudogene predicted gene 16089
Tssr54014 5 137625035 to 137625056 21 - TSS region transcription start site region 54014
Tssr54015 5 137625059 to 137625067 8 - TSS region transcription start site region 54015
Tssr54016 5 137625069 to 137625079 10 - TSS region transcription start site region 54016
Tssr49352 5 137625193 to 137625204 11 + TSS region transcription start site region 49352
Cpgi16843 5 137628577 to 137629676 1099 CpG island CpG island 16843
Tssr49353 5 137629112 to 137629123 11 + TSS region transcription start site region 49353
Lrch4 5 137629123 to 137641099 11976 + protein coding gene leucine-rich repeats and calponin homology (CH) domain containing 4
Tssr49354 5 137629149 to 137629160 11 + TSS region transcription start site region 49354
Tssr49355 5 137629169 to 137629202 33 + TSS region transcription start site region 49355
Gm20605 5 137629175 to 137642899 13724 + protein coding gene predicted gene 20605
Tssr49356 5 137630095 to 137630110 15 + TSS region transcription start site region 49356
Tssr49357 5 137630116 to 137630123 7 + TSS region transcription start site region 49357
Tssr49358 5 137630774 to 137630778 4 + TSS region transcription start site region 49358
Tssr49359 5 137630856 to 137630883 27 + TSS region transcription start site region 49359
Tssr49360 5 137633565 to 137633576 11 + TSS region transcription start site region 49360
Tssr49361 5 137636740 to 137636755 15 + TSS region transcription start site region 49361
Tssr49362 5 137636756 to 137636806 50 + TSS region transcription start site region 49362
Tssr49363 5 137638482 to 137638507 25 + TSS region transcription start site region 49363
Cpgi16844 5 137641115 to 137641491 376 CpG island CpG island 16844
Tssr49364 5 137641276 to 137641335 59 + TSS region transcription start site region 49364
Sap25 5 137641473 to 137642902 1429 + protein coding gene sin3 associated polypeptide
Irs3 5 137643032 to 137645714 2682 - protein coding gene insulin receptor substrate 3
Cpgi16845 5 137644481 to 137644653 172 CpG island CpG island 16845
Tssr54017 5 137644705 to 137644711 6 - TSS region transcription start site region 54017
Cpgi16846 5 137644998 to 137645878 880 CpG island CpG island 16846
Tssr54018 5 137645665 to 137645676 11 - TSS region transcription start site region 54018
Tssr54019 5 137645695 to 137645720 25 - TSS region transcription start site region 54019
Tssr54020 5 137645724 to 137645737 13 - TSS region transcription start site region 54020
Agfg2 5 137650463 to 137684726 34263 - protein coding gene ArfGAP with FG repeats 2
Tssr54021 5 137650563 to 137650565 2 - TSS region transcription start site region 54021
Tssr54022 5 137669571 to 137669575 4 - TSS region transcription start site region 54022