Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136783095-136983101

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col26a1 5 136741759 to 136883209 141450 - protein coding gene collagen, type XXVI, alpha 1
Cpgi16800 5 136810955 to 136811155 200 CpG island CpG island 16800
Tssr53871 5 136812539 to 136812540 1 - TSS region transcription start site region 53871
Gm30654 5 136826091 to 136834665 8574 + lncRNA gene predicted gene, 30654
Cpgi16801 5 136836495 to 136836806 311 CpG island CpG island 16801
Gm20485 5 136863637 to 136869722 6085 - sense intronic lncRNA gene predicted gene 20485
Tssr53872 5 136869729 to 136869736 7 - TSS region transcription start site region 53872
Cpgi16802 5 136881412 to 136883236 1824 CpG island CpG island 16802
Tssr53873 5 136883077 to 136883093 16 - TSS region transcription start site region 53873
Tssr1676 5 136883095 to 136883101 6 - TSS region transcription start site region 1676
Tssr53874 5 136883115 to 136883168 53 - TSS region transcription start site region 53874
Tssr53875 5 136883203 to 136883214 11 - TSS region transcription start site region 53875
Tssr53876 5 136883220 to 136883232 12 - TSS region transcription start site region 53876
Cpgi16803 5 136895117 to 136895352 235 CpG island CpG island 16803
Gm43649 5 136896644 to 136897034 390 + pseudogene predicted gene 43649
Cpgi16804 5 136908012 to 136908383 371 CpG island CpG island 16804
Tssr49276 5 136908130 to 136908174 44 + TSS region transcription start site region 49276
Ift22 5 136908150 to 136914509 6359 + protein coding gene intraflagellar transport 22
Tssr49277 5 136908181 to 136908202 21 + TSS region transcription start site region 49277
Tssr49278 5 136908204 to 136908226 22 + TSS region transcription start site region 49278
Tssr49279 5 136908229 to 136908232 3 + TSS region transcription start site region 49279
Cpgi16805 5 136918934 to 136919464 530 CpG island CpG island 16805
Tssr49280 5 136919137 to 136919188 51 + TSS region transcription start site region 49280
4933404O12Rik 5 136919146 to 136937109 17963 + lincRNA gene RIKEN cDNA 4933404O12 gene
Tssr49281 5 136919227 to 136919238 11 + TSS region transcription start site region 49281
Tssr49282 5 136919338 to 136919381 43 + TSS region transcription start site region 49282
Tssr49283 5 136919594 to 136919623 29 + TSS region transcription start site region 49283
Tssr49284 5 136932938 to 136932958 20 + TSS region transcription start site region 49284
Cpgi16806 5 136952885 to 136953335 450 CpG island CpG island 16806
Tssr49285 5 136953246 to 136953325 79 + TSS region transcription start site region 49285
Fis1 5 136953275 to 136966234 12959 + protein coding gene fission, mitochondrial 1
Tssr49286 5 136953689 to 136953693 4 + TSS region transcription start site region 49286
Tssr53877 5 136956699 to 136956709 10 - TSS region transcription start site region 53877
Cpgi16807 5 136962017 to 136962516 499 CpG island CpG island 16807
Tssr49287 5 136962081 to 136962129 48 + TSS region transcription start site region 49287
Tssr49288 5 136967815 to 136967826 11 + TSS region transcription start site region 49288
Tssr49289 5 136967827 to 136967840 13 + TSS region transcription start site region 49289
Tssr49290 5 136967859 to 136967875 16 + TSS region transcription start site region 49290
Cldn15 5 136967869 to 136975845 7976 + protein coding gene claudin 15
Tssr49291 5 136967896 to 136967907 11 + TSS region transcription start site region 49291
Tssr49292 5 136967909 to 136967924 15 + TSS region transcription start site region 49292
Tssr49293 5 136967930 to 136967941 11 + TSS region transcription start site region 49293
Tssr49294 5 136973911 to 136973929 18 + TSS region transcription start site region 49294
Tssr49295 5 136978076 to 136978078 2 + TSS region transcription start site region 49295
Znhit1 5 136982194 to 136987959 5765 - protein coding gene zinc finger, HIT domain containing 1