Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136736759-136888209

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16798	5	136739361 to 136739550	189		CpG island	CpG island 16798
Col26a1	5	136741759 to 136883209	141450	-	protein coding gene	collagen, type XXVI, alpha 1
Cpgi16799	5	136752184 to 136752492	308		CpG island	CpG island 16799
Cpgi16800	5	136810955 to 136811155	200		CpG island	CpG island 16800
Tssr53871	5	136812539 to 136812540	1	-	TSS region	transcription start site region 53871
Gm30654	5	136826091 to 136834665	8574	+	lncRNA gene	predicted gene, 30654
Cpgi16801	5	136836495 to 136836806	311		CpG island	CpG island 16801
Gm20485	5	136863637 to 136869722	6085	-	sense intronic lncRNA gene	predicted gene 20485
Tssr53872	5	136869729 to 136869736	7	-	TSS region	transcription start site region 53872
Cpgi16802	5	136881412 to 136883236	1824		CpG island	CpG island 16802
Tssr53873	5	136883077 to 136883093	16	-	TSS region	transcription start site region 53873
Tssr1676	5	136883095 to 136883101	6	-	TSS region	transcription start site region 1676
Tssr53874	5	136883115 to 136883168	53	-	TSS region	transcription start site region 53874
Tssr53875	5	136883203 to 136883214	11	-	TSS region	transcription start site region 53875
Tssr53876	5	136883220 to 136883232	12	-	TSS region	transcription start site region 53876