Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136168914-136228970

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orai2 5 136147456 to 136170656 23200 - protein coding gene ORAI calcium release-activated calcium modulator 2
Tssr53809 5 136169993 to 136169997 4 - TSS region transcription start site region 53809
Cpgi16786 5 136170265 to 136171501 1236 CpG island CpG island 16786
Tssr53810 5 136170634 to 136170661 27 - TSS region transcription start site region 53810
Tssr53811 5 136170671 to 136170698 27 - TSS region transcription start site region 53811
Tssr53812 5 136171165 to 136171176 11 - TSS region transcription start site region 53812
Tssr53813 5 136171179 to 136171190 11 - TSS region transcription start site region 53813
Tssr49247 5 136171559 to 136171584 25 + TSS region transcription start site region 49247
Tssr53814 5 136171596 to 136171629 33 - TSS region transcription start site region 53814
Tssr1672 5 136179750 to 136179787 37 + TSS region transcription start site region 1672
Prkrip1 5 136180357 to 136198954 18597 - protein coding gene Prkr interacting protein 1 (IL11 inducible)
Cpgi16787 5 136198262 to 136199265 1003 CpG island CpG island 16787
Tssr53815 5 136198914 to 136198970 56 - TSS region transcription start site region 53815
Tssr49248 5 136199023 to 136199060 37 + TSS region transcription start site region 49248
Gm5050 5 136211012 to 136211786 774 - pseudogene predicted gene 5050
Tssr53816 5 136217365 to 136217372 7 - TSS region transcription start site region 53816
Tssr49249 5 136217551 to 136217578 27 + TSS region transcription start site region 49249
Sh2b2 5 136218147 to 136246556 28409 - protein coding gene SH2B adaptor protein 2
Tssr49250 5 136228421 to 136228428 7 + TSS region transcription start site region 49250