Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136116117-136156124

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16783 5 136116383 to 136117104 721 CpG island CpG island 16783
Tssr53788 5 136116518 to 136116564 46 - TSS region transcription start site region 53788
Tssr49242 5 136116678 to 136116740 62 + TSS region transcription start site region 49242
Polr2j 5 136116691 to 136122947 6256 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide J
Gm43604 5 136120966 to 136121670 704 - antisense lncRNA gene predicted gene 43604
Lrwd1 5 136123066 to 136136074 13008 - protein coding gene leucine-rich repeats and WD repeat domain containing 1
Cpgi16784 5 136135520 to 136136342 822 CpG island CpG island 16784
Tssr53789 5 136135989 to 136136087 98 - TSS region transcription start site region 53789
Tssr53790 5 136136117 to 136136124 7 - TSS region transcription start site region 53790
Tssr53791 5 136136126 to 136136134 8 - TSS region transcription start site region 53791
Tssr49243 5 136136137 to 136136174 37 + TSS region transcription start site region 49243
Alkbh4 5 136136146 to 136141615 5469 + protein coding gene alkB homolog 4, lysine demethylase
Tssr49244 5 136136202 to 136136211 9 + TSS region transcription start site region 49244
Tssr49245 5 136136223 to 136136256 33 + TSS region transcription start site region 49245
Tssr49246 5 136136271 to 136136274 3 + TSS region transcription start site region 49246
Cpgi16785 5 136140296 to 136140658 362 CpG island CpG island 16785
Orai2 5 136147456 to 136170656 23200 - protein coding gene ORAI calcium release-activated calcium modulator 2