Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136101395-136221407

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rasa4 5 136083916 to 136111860 27944 + protein coding gene RAS p21 protein activator 4
Cpgi16782 5 136102181 to 136102781 600 CpG island CpG island 16782
Tssr49237 5 136102323 to 136102378 55 + TSS region transcription start site region 49237
Gm15701 5 136102604 to 136104436 1832 - antisense lncRNA gene predicted gene 15701
Tssr49238 5 136103363 to 136103374 11 + TSS region transcription start site region 49238
Mir7035 5 136105522 to 136105603 81 + miRNA gene microRNA 7035
Tssr49239 5 136110540 to 136110563 23 + TSS region transcription start site region 49239
Tssr49240 5 136110573 to 136110597 24 + TSS region transcription start site region 49240
Tssr49241 5 136110606 to 136110629 23 + TSS region transcription start site region 49241
Cpgi16783 5 136116383 to 136117104 721 CpG island CpG island 16783
Tssr53788 5 136116518 to 136116564 46 - TSS region transcription start site region 53788
Tssr49242 5 136116678 to 136116740 62 + TSS region transcription start site region 49242
Polr2j 5 136116691 to 136122947 6256 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide J
Gm43604 5 136120966 to 136121670 704 - antisense lncRNA gene predicted gene 43604
Lrwd1 5 136123066 to 136136074 13008 - protein coding gene leucine-rich repeats and WD repeat domain containing 1
Cpgi16784 5 136135520 to 136136342 822 CpG island CpG island 16784
Tssr53789 5 136135989 to 136136087 98 - TSS region transcription start site region 53789
Tssr53790 5 136136117 to 136136124 7 - TSS region transcription start site region 53790
Tssr53791 5 136136126 to 136136134 8 - TSS region transcription start site region 53791
Tssr49243 5 136136137 to 136136174 37 + TSS region transcription start site region 49243
Alkbh4 5 136136146 to 136141615 5469 + protein coding gene alkB homolog 4, lysine demethylase
Tssr49244 5 136136202 to 136136211 9 + TSS region transcription start site region 49244
Tssr49245 5 136136223 to 136136256 33 + TSS region transcription start site region 49245
Tssr49246 5 136136271 to 136136274 3 + TSS region transcription start site region 49246
Cpgi16785 5 136140296 to 136140658 362 CpG island CpG island 16785
Orai2 5 136147456 to 136170656 23200 - protein coding gene ORAI calcium release-activated calcium modulator 2
Tssr53792 5 136160746 to 136160771 25 - TSS region transcription start site region 53792
Tssr53793 5 136160948 to 136160963 15 - TSS region transcription start site region 53793
Tssr53794 5 136161207 to 136161227 20 - TSS region transcription start site region 53794
Tssr53795 5 136161245 to 136161281 36 - TSS region transcription start site region 53795
Tssr53796 5 136161292 to 136161310 18 - TSS region transcription start site region 53796
Tssr53797 5 136161323 to 136161360 37 - TSS region transcription start site region 53797
Tssr53798 5 136161381 to 136161392 11 - TSS region transcription start site region 53798
Tssr53799 5 136161395 to 136161407 12 - TSS region transcription start site region 53799
Tssr53800 5 136161415 to 136161461 46 - TSS region transcription start site region 53800
D5Mit341 5 136161723 to 136161920 197 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 341
Tssr53801 5 136162022 to 136162033 11 - TSS region transcription start site region 53801
Tssr53802 5 136162058 to 136162071 13 - TSS region transcription start site region 53802
Tssr53803 5 136165042 to 136165058 16 - TSS region transcription start site region 53803
Tssr53804 5 136165089 to 136165100 11 - TSS region transcription start site region 53804
Tssr53805 5 136165227 to 136165232 5 - TSS region transcription start site region 53805
Tssr53806 5 136165242 to 136165253 11 - TSS region transcription start site region 53806
Tssr53807 5 136165835 to 136165851 16 - TSS region transcription start site region 53807
Tssr53808 5 136166095 to 136166101 6 - TSS region transcription start site region 53808
Tssr53809 5 136169993 to 136169997 4 - TSS region transcription start site region 53809
Cpgi16786 5 136170265 to 136171501 1236 CpG island CpG island 16786
Tssr53810 5 136170634 to 136170661 27 - TSS region transcription start site region 53810
Tssr53811 5 136170671 to 136170698 27 - TSS region transcription start site region 53811
Tssr53812 5 136171165 to 136171176 11 - TSS region transcription start site region 53812
Tssr53813 5 136171179 to 136171190 11 - TSS region transcription start site region 53813
Tssr49247 5 136171559 to 136171584 25 + TSS region transcription start site region 49247
Tssr53814 5 136171596 to 136171629 33 - TSS region transcription start site region 53814
Tssr1672 5 136179750 to 136179787 37 + TSS region transcription start site region 1672
Prkrip1 5 136180357 to 136198954 18597 - protein coding gene Prkr interacting protein 1 (IL11 inducible)
Cpgi16787 5 136198262 to 136199265 1003 CpG island CpG island 16787
Tssr53815 5 136198914 to 136198970 56 - TSS region transcription start site region 53815
Tssr49248 5 136199023 to 136199060 37 + TSS region transcription start site region 49248
Gm5050 5 136211012 to 136211786 774 - pseudogene predicted gene 5050
Tssr53816 5 136217365 to 136217372 7 - TSS region transcription start site region 53816
Tssr49249 5 136217551 to 136217578 27 + TSS region transcription start site region 49249
Sh2b2 5 136218147 to 136246556 28409 - protein coding gene SH2B adaptor protein 2