Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136091518-136141564

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rasa4 5 136083916 to 136111860 27944 + protein coding gene RAS p21 protein activator 4
Tssr49233 5 136093294 to 136093301 7 + TSS region transcription start site region 49233
Gm22214 5 136096260 to 136096431 171 - snRNA gene predicted gene, 22214
Tssr49234 5 136096446 to 136096455 9 + TSS region transcription start site region 49234
Tssr49235 5 136096870 to 136096884 14 + TSS region transcription start site region 49235
Tssr49236 5 136099615 to 136099621 6 + TSS region transcription start site region 49236
Cpgi16782 5 136102181 to 136102781 600 CpG island CpG island 16782
Tssr49237 5 136102323 to 136102378 55 + TSS region transcription start site region 49237
Gm15701 5 136102604 to 136104436 1832 - antisense lncRNA gene predicted gene 15701
Tssr49238 5 136103363 to 136103374 11 + TSS region transcription start site region 49238
Mir7035 5 136105522 to 136105603 81 + miRNA gene microRNA 7035
Tssr49239 5 136110540 to 136110563 23 + TSS region transcription start site region 49239
Tssr49240 5 136110573 to 136110597 24 + TSS region transcription start site region 49240
Tssr49241 5 136110606 to 136110629 23 + TSS region transcription start site region 49241
Cpgi16783 5 136116383 to 136117104 721 CpG island CpG island 16783
Tssr53788 5 136116518 to 136116564 46 - TSS region transcription start site region 53788
Tssr49242 5 136116678 to 136116740 62 + TSS region transcription start site region 49242
Polr2j 5 136116691 to 136122947 6256 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide J
Gm43604 5 136120966 to 136121670 704 - antisense lncRNA gene predicted gene 43604
Lrwd1 5 136123066 to 136136074 13008 - protein coding gene leucine-rich repeats and WD repeat domain containing 1
Cpgi16784 5 136135520 to 136136342 822 CpG island CpG island 16784
Tssr53789 5 136135989 to 136136087 98 - TSS region transcription start site region 53789
Tssr53790 5 136136117 to 136136124 7 - TSS region transcription start site region 53790
Tssr53791 5 136136126 to 136136134 8 - TSS region transcription start site region 53791
Tssr49243 5 136136137 to 136136174 37 + TSS region transcription start site region 49243
Alkbh4 5 136136146 to 136141615 5469 + protein coding gene alkB homolog 4, lysine demethylase
Tssr49244 5 136136202 to 136136211 9 + TSS region transcription start site region 49244
Tssr49245 5 136136223 to 136136256 33 + TSS region transcription start site region 49245
Tssr49246 5 136136271 to 136136274 3 + TSS region transcription start site region 49246
Cpgi16785 5 136140296 to 136140658 362 CpG island CpG island 16785