Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135774840-135895641

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Styxl1 5 135747220 to 135778385 31165 - protein coding gene serine/threonine/tyrosine interacting-like 1
Gm30205 5 135772803 to 135777984 5181 + lncRNA gene predicted gene, 30205
Tssr49186 5 135776626 to 135776636 10 + TSS region transcription start site region 49186
Cpgi16763 5 135777813 to 135779347 1534 CpG island CpG island 16763
Tssr53761 5 135778282 to 135778328 46 - TSS region transcription start site region 53761
Tssr53762 5 135778340 to 135778391 51 - TSS region transcription start site region 53762
Tssr49187 5 135778465 to 135778471 6 + TSS region transcription start site region 49187
Tssr49188 5 135778628 to 135778645 17 + TSS region transcription start site region 49188
Tssr49189 5 135778647 to 135778663 16 + TSS region transcription start site region 49189
Mdh2 5 135778649 to 135790386 11737 + protein coding gene malate dehydrogenase 2, NAD (mitochondrial)
Tssr49190 5 135778674 to 135778689 15 + TSS region transcription start site region 49190
Tssr49191 5 135778700 to 135778712 12 + TSS region transcription start site region 49191
Tssr49192 5 135783336 to 135783355 19 + TSS region transcription start site region 49192
Tssr49193 5 135783365 to 135783409 44 + TSS region transcription start site region 49193
Tssr49194 5 135789202 to 135789225 23 + TSS region transcription start site region 49194
Cpgi16764 5 135806679 to 135807065 386 CpG island CpG island 16764
Tssr49195 5 135806859 to 135806902 43 + TSS region transcription start site region 49195
Srrm3 5 135806890 to 135874772 67882 + protein coding gene serine/arginine repetitive matrix 3
D5Mit33 5 135829291 to 135829405 114 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 33
D5Mit33.2 5 135829408 to 135829531 123 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 33.2
Cpgi16765 5 135834840 to 135835641 801 CpG island CpG island 16765
Gm23268 5 135837295 to 135837372 77 - miRNA gene predicted gene, 23268
Srrm3os 5 135843057 to 135844946 1889 - antisense lncRNA gene serine/arginine repetitive matrix 3, opposite strand
Tssr49196 5 135851420 to 135851451 31 + TSS region transcription start site region 49196
Cpgi16766 5 135851955 to 135852566 611 CpG island CpG island 16766
Cpgi16767 5 135856874 to 135857512 638 CpG island CpG island 16767
Tssr49197 5 135862854 to 135862859 5 + TSS region transcription start site region 49197
Tssr49198 5 135863020 to 135863032 12 + TSS region transcription start site region 49198
Tssr49199 5 135863042 to 135863054 12 + TSS region transcription start site region 49199
Cpgi16768 5 135867683 to 135869355 1672 CpG island CpG island 16768
Cpgi16769 5 135873085 to 135873268 183 CpG island CpG island 16769
Gm22450 5 135875657 to 135875763 106 + snRNA gene predicted gene, 22450
Cpgi16770 5 135887710 to 135888086 376 CpG island CpG island 16770
Tssr49200 5 135887905 to 135887923 18 + TSS region transcription start site region 49200
Hspb1 5 135887919 to 135889563 1644 + protein coding gene heat shock protein 1
Tssr49201 5 135887940 to 135887970 30 + TSS region transcription start site region 49201
Tssr49202 5 135887975 to 135887986 11 + TSS region transcription start site region 49202
Tssr49203 5 135887988 to 135888011 23 + TSS region transcription start site region 49203
Cpgi16771 5 135888410 to 135888874 464 CpG island CpG island 16771
Tssr49204 5 135889038 to 135889042 4 + TSS region transcription start site region 49204