Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135738465-135818471

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem120a 5 135735490 to 135744172 8682 - protein coding gene transmembrane protein 120A
Cpgi16762 5 135743633 to 135744813 1180 CpG island CpG island 16762
Tssr53758 5 135744159 to 135744180 21 - TSS region transcription start site region 53758
Tssr53759 5 135744196 to 135744204 8 - TSS region transcription start site region 53759
Tssr53760 5 135744206 to 135744271 65 - TSS region transcription start site region 53760
Styxl1 5 135747220 to 135778385 31165 - protein coding gene serine/threonine/tyrosine interacting-like 1
Gm30205 5 135772803 to 135777984 5181 + lncRNA gene predicted gene, 30205
Tssr49186 5 135776626 to 135776636 10 + TSS region transcription start site region 49186
Cpgi16763 5 135777813 to 135779347 1534 CpG island CpG island 16763
Tssr53761 5 135778282 to 135778328 46 - TSS region transcription start site region 53761
Tssr53762 5 135778340 to 135778391 51 - TSS region transcription start site region 53762
Tssr49187 5 135778465 to 135778471 6 + TSS region transcription start site region 49187
Tssr49188 5 135778628 to 135778645 17 + TSS region transcription start site region 49188
Tssr49189 5 135778647 to 135778663 16 + TSS region transcription start site region 49189
Mdh2 5 135778649 to 135790386 11737 + protein coding gene malate dehydrogenase 2, NAD (mitochondrial)
Tssr49190 5 135778674 to 135778689 15 + TSS region transcription start site region 49190
Tssr49191 5 135778700 to 135778712 12 + TSS region transcription start site region 49191
Tssr49192 5 135783336 to 135783355 19 + TSS region transcription start site region 49192
Tssr49193 5 135783365 to 135783409 44 + TSS region transcription start site region 49193
Tssr49194 5 135789202 to 135789225 23 + TSS region transcription start site region 49194
Cpgi16764 5 135806679 to 135807065 386 CpG island CpG island 16764
Tssr49195 5 135806859 to 135806902 43 + TSS region transcription start site region 49195
Srrm3 5 135806890 to 135874772 67882 + protein coding gene serine/arginine repetitive matrix 3