Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135171209-135331242

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcl7b 5 135168372 to 135181852 13480 + protein coding gene B cell CLL/lymphoma 7B
Cpgi16746 5 135186658 to 135188229 1571 CpG island CpG island 16746
Tssr49148 5 135187251 to 135187269 18 + TSS region transcription start site region 49148
Tssr49149 5 135187304 to 135187333 29 + TSS region transcription start site region 49149
Baz1b 5 135187323 to 135246131 58808 + protein coding gene bromodomain adjacent to zinc finger domain, 1B
Tssr49150 5 135187348 to 135187359 11 + TSS region transcription start site region 49150
Tssr49151 5 135187507 to 135187595 88 + TSS region transcription start site region 49151
Tssr49152 5 135188461 to 135188473 12 + TSS region transcription start site region 49152
Gm25315 5 135207988 to 135208108 120 + miRNA gene predicted gene, 25315
Tssr49153 5 135217498 to 135217509 11 + TSS region transcription start site region 49153
Tssr49154 5 135217768 to 135217787 19 + TSS region transcription start site region 49154
Tssr49155 5 135218028 to 135218046 18 + TSS region transcription start site region 49155
Tssr49156 5 135230282 to 135230312 30 + TSS region transcription start site region 49156
Fzd9 5 135248938 to 135251047 2109 - protein coding gene frizzled class receptor 9
Cpgi16747 5 135249640 to 135251659 2019 CpG island CpG island 16747
Tssr53729 5 135251209 to 135251242 33 - TSS region transcription start site region 53729
Tssr53730 5 135251244 to 135251277 33 - TSS region transcription start site region 53730
9430007M09Rik 5 135264326 to 135265129 803 + unclassified gene RIKEN cDNA 9430007M09 gene
Cpgi16748 5 135276504 to 135276956 452 CpG island CpG island 16748
Fkbp6 5 135291704 to 135350044 58340 - protein coding gene FK506 binding protein 6