Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135006125-135076165

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps29-ps 5 135006577 to 135006748 171 + pseudogene ribosomal protein S29, pseudogene
Gm43372 5 135007093 to 135010108 3015 - unclassified gene predicted gene 43372
Cpgi16736 5 135008600 to 135010174 1574 CpG island CpG island 16736
Tssr53715 5 135008809 to 135008830 21 - TSS region transcription start site region 53715
Tssr53716 5 135008838 to 135008860 22 - TSS region transcription start site region 53716
Abhd11 5 135009152 to 135012175 3023 + protein coding gene abhydrolase domain containing 11
Tssr49120 5 135009307 to 135009317 10 + TSS region transcription start site region 49120
Tssr49121 5 135009438 to 135009453 15 + TSS region transcription start site region 49121
Tssr49122 5 135009633 to 135009699 66 + TSS region transcription start site region 49122
Tssr49123 5 135009700 to 135009726 26 + TSS region transcription start site region 49123
Tssr49124 5 135009748 to 135009765 17 + TSS region transcription start site region 49124
Tssr49125 5 135009767 to 135009776 9 + TSS region transcription start site region 49125
Tssr49126 5 135009834 to 135009845 11 + TSS region transcription start site region 49126
Tssr49127 5 135009890 to 135009901 11 + TSS region transcription start site region 49127
Tssr49128 5 135009932 to 135010014 82 + TSS region transcription start site region 49128
Tssr1661 5 135010021 to 135010032 11 + TSS region transcription start site region 1661
Abhd11os 5 135012122 to 135013157 1035 - antisense lncRNA gene abhydrolase domain containing 11, opposite strand
Tssr1662 5 135012727 to 135012737 10 - TSS region transcription start site region 1662
Tssr53717 5 135012746 to 135012761 15 - TSS region transcription start site region 53717
Tssr53718 5 135012762 to 135012808 46 - TSS region transcription start site region 53718
Tssr53719 5 135012812 to 135012823 11 - TSS region transcription start site region 53719
Tssr53720 5 135012857 to 135012868 11 - TSS region transcription start site region 53720
Tssr53721 5 135013114 to 135013125 11 - TSS region transcription start site region 53721
Tssr53722 5 135013131 to 135013158 27 - TSS region transcription start site region 53722
Tssr1663 5 135013159 to 135013170 11 - TSS region transcription start site region 1663
Tssr1664 5 135013177 to 135013204 27 - TSS region transcription start site region 1664
Cpgi16737 5 135023264 to 135024104 840 CpG island CpG island 16737
Stx1a 5 135023482 to 135051100 27618 + protein coding gene syntaxin 1A (brain)
Tssr49129 5 135023506 to 135023507 1 + TSS region transcription start site region 49129
Tssr49130 5 135023521 to 135023580 59 + TSS region transcription start site region 49130
Tssr49131 5 135041125 to 135041165 40 + TSS region transcription start site region 49131
Cpgi16738 5 135041936 to 135042219 283 CpG island CpG island 16738
Bud23 5 135052957 to 135064666 11709 - protein coding gene BUD23, rRNA methyltransferase and ribosome maturation factor
Tssr1665 5 135053405 to 135053428 23 - TSS region transcription start site region 1665
Gm25492 5 135053988 to 135054116 128 - snoRNA gene predicted gene, 25492
D5Mit325 5 135059703 to 135059822 119 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 325
Cpgi16739 5 135063695 to 135064946 1251 CpG island CpG island 16739
Tssr53723 5 135064051 to 135064060 9 - TSS region transcription start site region 53723
Tssr53724 5 135064063 to 135064116 53 - TSS region transcription start site region 53724
Dnajc30 5 135064206 to 135065365 1159 + protein coding gene DnaJ heat shock protein family (Hsp40) member C30
Tssr49132 5 135064220 to 135064254 34 + TSS region transcription start site region 49132
Vps37d 5 135072900 to 135078266 5366 - protein coding gene vacuolar protein sorting 37D