Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134987093-135030108

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16734 5 134985702 to 134987352 1650 CpG island CpG island 16734
Cldn3 5 134986214 to 134987472 1258 + protein coding gene claudin 3
Tssr49118 5 134987140 to 134987163 23 + TSS region transcription start site region 49118
Wbscr25 5 134987433 to 135001350 13917 - antisense lncRNA gene Williams Beuren syndrome chromosome region 25 (human)
Tssr49119 5 134990036 to 134990042 6 + TSS region transcription start site region 49119
Tssr53709 5 135000757 to 135000762 5 - TSS region transcription start site region 53709
Tssr53710 5 135000854 to 135000861 7 - TSS region transcription start site region 53710
Tssr53711 5 135000933 to 135000943 10 - TSS region transcription start site region 53711
Tssr53712 5 135001280 to 135001285 5 - TSS region transcription start site region 53712
Tssr53713 5 135001288 to 135001361 73 - TSS region transcription start site region 53713
Tssr53714 5 135001365 to 135001376 11 - TSS region transcription start site region 53714
Cpgi16735 5 135001397 to 135001588 191 CpG island CpG island 16735
Rps29-ps 5 135006577 to 135006748 171 + pseudogene ribosomal protein S29, pseudogene
Gm43372 5 135007093 to 135010108 3015 - unclassified gene predicted gene 43372
Cpgi16736 5 135008600 to 135010174 1574 CpG island CpG island 16736
Tssr53715 5 135008809 to 135008830 21 - TSS region transcription start site region 53715
Tssr53716 5 135008838 to 135008860 22 - TSS region transcription start site region 53716
Abhd11 5 135009152 to 135012175 3023 + protein coding gene abhydrolase domain containing 11
Tssr49120 5 135009307 to 135009317 10 + TSS region transcription start site region 49120
Tssr49121 5 135009438 to 135009453 15 + TSS region transcription start site region 49121
Tssr49122 5 135009633 to 135009699 66 + TSS region transcription start site region 49122
Tssr49123 5 135009700 to 135009726 26 + TSS region transcription start site region 49123
Tssr49124 5 135009748 to 135009765 17 + TSS region transcription start site region 49124
Tssr49125 5 135009767 to 135009776 9 + TSS region transcription start site region 49125
Tssr49126 5 135009834 to 135009845 11 + TSS region transcription start site region 49126
Tssr49127 5 135009890 to 135009901 11 + TSS region transcription start site region 49127
Tssr49128 5 135009932 to 135010014 82 + TSS region transcription start site region 49128
Tssr1661 5 135010021 to 135010032 11 + TSS region transcription start site region 1661
Abhd11os 5 135012122 to 135013157 1035 - antisense lncRNA gene abhydrolase domain containing 11, opposite strand
Tssr1662 5 135012727 to 135012737 10 - TSS region transcription start site region 1662
Tssr53717 5 135012746 to 135012761 15 - TSS region transcription start site region 53717
Tssr53718 5 135012762 to 135012808 46 - TSS region transcription start site region 53718
Tssr53719 5 135012812 to 135012823 11 - TSS region transcription start site region 53719
Tssr53720 5 135012857 to 135012868 11 - TSS region transcription start site region 53720
Tssr53721 5 135013114 to 135013125 11 - TSS region transcription start site region 53721
Tssr53722 5 135013131 to 135013158 27 - TSS region transcription start site region 53722
Tssr1663 5 135013159 to 135013170 11 - TSS region transcription start site region 1663
Tssr1664 5 135013177 to 135013204 27 - TSS region transcription start site region 1664
Cpgi16737 5 135023264 to 135024104 840 CpG island CpG island 16737
Stx1a 5 135023482 to 135051100 27618 + protein coding gene syntaxin 1A (brain)
Tssr49129 5 135023506 to 135023507 1 + TSS region transcription start site region 49129
Tssr49130 5 135023521 to 135023580 59 + TSS region transcription start site region 49130