Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134941843-134991863

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mettl27 5 134932368 to 134942637 10269 + protein coding gene methyltransferase like 27
Cldn4 5 134945123 to 134946934 1811 - protein coding gene claudin 4
Tssr49107 5 134945126 to 134945130 4 + TSS region transcription start site region 49107
Tssr53699 5 134945251 to 134945258 7 - TSS region transcription start site region 53699
Tssr49108 5 134945268 to 134945307 39 + TSS region transcription start site region 49108
Tssr53700 5 134945816 to 134945836 20 - TSS region transcription start site region 53700
Tssr53701 5 134946021 to 134946031 10 - TSS region transcription start site region 53701
Cpgi16731 5 134946085 to 134946772 687 CpG island CpG island 16731
Tssr49109 5 134946119 to 134946181 62 + TSS region transcription start site region 49109
Tssr53702 5 134946255 to 134946271 16 - TSS region transcription start site region 53702
Tssr53703 5 134946439 to 134946443 4 - TSS region transcription start site region 53703
Tssr53704 5 134946896 to 134946906 10 - TSS region transcription start site region 53704
Tssr53705 5 134946917 to 134946945 28 - TSS region transcription start site region 53705
Tssr53706 5 134951118 to 134951145 27 - TSS region transcription start site region 53706
Cpgi16732 5 134951798 to 134951961 163 CpG island CpG island 16732
D5Mit322 5 134957043 to 134957166 123 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 322
Tssr49110 5 134957787 to 134957832 45 + TSS region transcription start site region 49110
Cpgi16733 5 134965884 to 134966552 668 CpG island CpG island 16733
Tssr53707 5 134966479 to 134966492 13 - TSS region transcription start site region 53707
Tssr53708 5 134966504 to 134966514 10 - TSS region transcription start site region 53708
Tssr49111 5 134966843 to 134966863 20 + TSS region transcription start site region 49111
Cpgi16734 5 134985702 to 134987352 1650 CpG island CpG island 16734
Tssr49112 5 134986016 to 134986033 17 + TSS region transcription start site region 49112
Tssr49113 5 134986169 to 134986172 3 + TSS region transcription start site region 49113
Tssr49114 5 134986191 to 134986270 79 + TSS region transcription start site region 49114
Cldn3 5 134986214 to 134987472 1258 + protein coding gene claudin 3
Tssr49115 5 134986276 to 134986292 16 + TSS region transcription start site region 49115
Tssr49116 5 134986302 to 134986323 21 + TSS region transcription start site region 49116
Tssr49117 5 134986820 to 134986833 13 + TSS region transcription start site region 49117
Tssr49118 5 134987140 to 134987163 23 + TSS region transcription start site region 49118
Wbscr25 5 134987433 to 135001350 13917 - antisense lncRNA gene Williams Beuren syndrome chromosome region 25 (human)
Tssr49119 5 134990036 to 134990042 6 + TSS region transcription start site region 49119