MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:134866593-134941733

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmem270	5	134901593 to 134906733	5140	-	protein coding gene	transmembrane protein 270
Tssr53693	5	134906719 to 134906724	5	-	TSS region	transcription start site region 53693
Tssr53694	5	134906726 to 134906744	18	-	TSS region	transcription start site region 53694
Cpgi16729	5	134907244 to 134907471	227		CpG island	CpG island 16729
Cldn13	5	134914249 to 134915526	1277	-	protein coding gene	claudin 13
Tssr1659	5	134915385 to 134915406	21	-	TSS region	transcription start site region 1659
Tssr53695	5	134915470 to 134915486	16	-	TSS region	transcription start site region 53695
Tssr53696	5	134915494 to 134915505	11	-	TSS region	transcription start site region 53696
Tssr53697	5	134915512 to 134915542	30	-	TSS region	transcription start site region 53697
4933439J24Rik	5	134919788 to 134920640	852	+	lincRNA gene	RIKEN cDNA 4933439J24 gene
9030607J07Rik	5	134929848 to 134931469	1621	-	lncRNA gene	RIKEN cDNA 9030607J07 gene
Cpgi16730	5	134932194 to 134932890	696		CpG island	CpG island 16730
Tssr49105	5	134932351 to 134932382	31	+	TSS region	transcription start site region 49105
Mettl27	5	134932368 to 134942637	10269	+	protein coding gene	methyltransferase like 27
Tssr49106	5	134932395 to 134932422	27	+	TSS region	transcription start site region 49106
Tssr53698	5	134932671 to 134932688	17	-	TSS region	transcription start site region 53698
Tssr1660	5	134938452 to 134938453	1	+	TSS region	transcription start site region 1660