Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134538146-134580171

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Clip2	5	134489383 to 134552434	63051	-	protein coding gene	CAP-GLY domain containing linker protein 2
Tssr53645	5	134549956 to 134549964	8	-	TSS region	transcription start site region 53645
Cpgi16721	5	134551405 to 134552784	1379		CpG island	CpG island 16721
Gm42884	5	134552057 to 134558495	6438	+	antisense lncRNA gene	predicted gene 42884
Tssr53646	5	134552139 to 134552233	94	-	TSS region	transcription start site region 53646
Tssr53647	5	134552241 to 134552282	41	-	TSS region	transcription start site region 53647
Tssr53648	5	134552381 to 134552413	32	-	TSS region	transcription start site region 53648
Tssr53649	5	134552414 to 134552444	30	-	TSS region	transcription start site region 53649
Tssr53650	5	134552453 to 134552476	23	-	TSS region	transcription start site region 53650
Cpgi16722	5	134555534 to 134555719	185		CpG island	CpG island 16722
Syna	5	134558146 to 134560171	2025	-	protein coding gene	syncytin a
Cpgi16723	5	134558503 to 134558891	388		CpG island	CpG island 16723
Tssr53651	5	134563834 to 134563854	20	-	TSS region	transcription start site region 53651
Tssr53652	5	134564070 to 134564087	17	-	TSS region	transcription start site region 53652
Tssr53653	5	134565546 to 134565561	15	-	TSS region	transcription start site region 53653
Mir7228	5	134572076 to 134572114	38	+	miRNA gene	microRNA 7228