Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Del(5Gtf2i-Limk1)1Uta | 5 | 450764 | chromosomal deletion | deletion, Chr 5, Uta Francke 1 | ||
Clip2 | 5 | 63051 | - | protein coding gene | CAP-GLY domain containing linker protein 2 | |
2700029L08Rik | 5 | 1464 | - | unclassified gene | RIKEN cDNA 2700029L08 gene | |
Tssr53644 | 5 | 13 | - | TSS region | transcription start site region 53644 | |
Cpgi16720 | 5 | 293 | CpG island | CpG island 16720 | ||
Tssr53645 | 5 | 8 | - | TSS region | transcription start site region 53645 | |
Cpgi16721 | 5 | 1379 | CpG island | CpG island 16721 | ||
Gm42884 | 5 | 6438 | + | antisense lncRNA gene | predicted gene 42884 | |
Tssr53646 | 5 | 94 | - | TSS region | transcription start site region 53646 | |
Tssr53647 | 5 | 41 | - | TSS region | transcription start site region 53647 | |
Tssr53648 | 5 | 32 | - | TSS region | transcription start site region 53648 | |
Tssr53649 | 5 | 30 | - | TSS region | transcription start site region 53649 | |
Tssr53650 | 5 | 23 | - | TSS region | transcription start site region 53650 | |
Cpgi16722 | 5 | 185 | CpG island | CpG island 16722 | ||
Syna | 5 | 2025 | - | protein coding gene | syncytin a | |
Cpgi16723 | 5 | 388 | CpG island | CpG island 16723 | ||
Tssr53651 | 5 | 20 | - | TSS region | transcription start site region 53651 | |
Tssr53652 | 5 | 17 | - | TSS region | transcription start site region 53652 | |
Tssr53653 | 5 | 15 | - | TSS region | transcription start site region 53653 | |
Mir7228 | 5 | 38 | + | miRNA gene | microRNA 7228 | |
Cpgi16724 | 5 | 660 | CpG island | CpG island 16724 | ||
Rfc2 | 5 | 15638 | + | protein coding gene | replication factor C (activator 1) 2 | |
Tssr49090 | 5 | 7 | + | TSS region | transcription start site region 49090 | |
Tssr49091 | 5 | 52 | + | TSS region | transcription start site region 49091 | |
Tssr49092 | 5 | 11 | + | TSS region | transcription start site region 49092 | |
Tssr49093 | 5 | 8 | + | TSS region | transcription start site region 49093 | |
Lat2 | 5 | 15003 | - | protein coding gene | linker for activation of T cells family, member 2 | |
Tssr49094 | 5 | 50 | + | TSS region | transcription start site region 49094 | |
Tssr53654 | 5 | 5 | - | TSS region | transcription start site region 53654 | |
Tssr53655 | 5 | 18 | - | TSS region | transcription start site region 53655 | |
Tssr53656 | 5 | 12 | - | TSS region | transcription start site region 53656 | |
Tssr49095 | 5 | 43 | + | TSS region | transcription start site region 49095 | |
Tssr49096 | 5 | 13 | + | TSS region | transcription start site region 49096 | |
Tssr49097 | 5 | 8 | + | TSS region | transcription start site region 49097 | |
Tssr53657 | 5 | 76 | - | TSS region | transcription start site region 53657 | |
Eif4h | 5 | 19537 | - | protein coding gene | eukaryotic translation initiation factor 4H | |
Tssr53658 | 5 | 43 | - | TSS region | transcription start site region 53658 | |
Tssr53659 | 5 | 2 | - | TSS region | transcription start site region 53659 | |
Cpgi16725 | 5 | 1368 | CpG island | CpG island 16725 | ||
Tssr53660 | 5 | 16 | - | TSS region | transcription start site region 53660 | |
Tssr53661 | 5 | 37 | - | TSS region | transcription start site region 53661 | |
Tssr53662 | 5 | 7 | - | TSS region | transcription start site region 53662 | |
Tssr53663 | 5 | 36 | - | TSS region | transcription start site region 53663 | |
Tssr53664 | 5 | 5 | - | TSS region | transcription start site region 53664 | |
Del(5Limk1-Trim50)2Uta | 5 | 711966 | chromosomal deletion | deletion, Chr 5, Uta Francke 2 | ||
Limk1 | 5 | 32559 | - | protein coding gene | LIM-domain containing, protein kinase | |
Tssr53665 | 5 | 49 | - | TSS region | transcription start site region 53665 | |
Tssr53666 | 5 | 28 | - | TSS region | transcription start site region 53666 | |
Gm10369 | 5 | 3655 | + | antisense lncRNA gene | predicted gene 10369 | |
Tssr49098 | 5 | 19 | + | TSS region | transcription start site region 49098 | |
Tssr49099 | 5 | 24 | + | TSS region | transcription start site region 49099 | |
Tssr53667 | 5 | 64 | - | TSS region | transcription start site region 53667 | |
Cpgi16726 | 5 | 1330 | CpG island | CpG island 16726 | ||
Tssr53668 | 5 | 7 | - | TSS region | transcription start site region 53668 | |
Tssr53669 | 5 | 19 | - | TSS region | transcription start site region 53669 | |
Tssr53670 | 5 | 42 | - | TSS region | transcription start site region 53670 | |
Tssr53671 | 5 | 11 | - | TSS region | transcription start site region 53671 | |
Eln | 5 | 44730 | - | protein coding gene | elastin | |
Tssr53672 | 5 | 10 | - | TSS region | transcription start site region 53672 | |
Tssr53673 | 5 | 5 | - | TSS region | transcription start site region 53673 | |
Tssr49100 | 5 | 15 | + | TSS region | transcription start site region 49100 | |
Tssr53674 | 5 | 20 | - | TSS region | transcription start site region 53674 | |
Tssr53675 | 5 | 5 | - | TSS region | transcription start site region 53675 | |
Tssr53676 | 5 | 12 | - | TSS region | transcription start site region 53676 | |
Tssr53677 | 5 | 16 | - | TSS region | transcription start site region 53677 | |
Tssr53678 | 5 | 15 | - | TSS region | transcription start site region 53678 | |
Tssr53679 | 5 | 18 | - | TSS region | transcription start site region 53679 | |
Tssr53680 | 5 | 18 | - | TSS region | transcription start site region 53680 | |
Tssr53681 | 5 | 20 | - | TSS region | transcription start site region 53681 | |
Tssr49101 | 5 | 11 | + | TSS region | transcription start site region 49101 | |
Tssr53682 | 5 | 42 | - | TSS region | transcription start site region 53682 | |
Tssr53683 | 5 | 12 | - | TSS region | transcription start site region 53683 | |
Tssr53684 | 5 | 48 | - | TSS region | transcription start site region 53684 | |
Tssr53685 | 5 | 38 | - | TSS region | transcription start site region 53685 | |
Tssr53686 | 5 | 12 | - | TSS region | transcription start site region 53686 | |
Tssr49102 | 5 | 26 | + | TSS region | transcription start site region 49102 | |
Tssr53687 | 5 | 4 | - | TSS region | transcription start site region 53687 | |
Tssr53688 | 5 | 19 | - | TSS region | transcription start site region 53688 | |
Tssr53689 | 5 | 13 | - | TSS region | transcription start site region 53689 | |
Tssr53690 | 5 | 4 | - | TSS region | transcription start site region 53690 | |
D5Mit282 | 5 | 101 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 282 | ||
Cpgi16727 | 5 | 345 | CpG island | CpG island 16727 | ||
Gm30003 | 5 | 75924 | + | antisense lncRNA gene | predicted gene, 30003 | |
Tssr53691 | 5 | 17 | - | TSS region | transcription start site region 53691 | |
Tssr53692 | 5 | 30 | - | TSS region | transcription start site region 53692 | |
Tssr49103 | 5 | 3 | + | TSS region | transcription start site region 49103 | |
Cpgi16728 | 5 | 197 | CpG island | CpG island 16728 | ||
D5Dcr13 | 5 | 95 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 13 | ||
D5Mit219 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 219 | ||
Tssr49104 | 5 | 3 | + | TSS region | transcription start site region 49104 | |
Tmem270 | 5 | 5140 | - | protein coding gene | transmembrane protein 270 | |
Tssr53693 | 5 | 5 | - | TSS region | transcription start site region 53693 | |
Tssr53694 | 5 | 18 | - | TSS region | transcription start site region 53694 | |
Cpgi16729 | 5 | 227 | CpG island | CpG island 16729 | ||
Cldn13 | 5 | 1277 | - | protein coding gene | claudin 13 | |
Tssr1659 | 5 | 21 | - | TSS region | transcription start site region 1659 | |
Tssr53695 | 5 | 16 | - | TSS region | transcription start site region 53695 | |
Tssr53696 | 5 | 11 | - | TSS region | transcription start site region 53696 | |
Tssr53697 | 5 | 30 | - | TSS region | transcription start site region 53697 | |
4933439J24Rik | 5 | 852 | + | lincRNA gene | RIKEN cDNA 4933439J24 gene | |
9030607J07Rik | 5 | 1621 | - | lncRNA gene | RIKEN cDNA 9030607J07 gene | |
Cpgi16730 | 5 | 696 | CpG island | CpG island 16730 | ||
Tssr49105 | 5 | 31 | + | TSS region | transcription start site region 49105 | |
Mettl27 | 5 | 10269 | + | protein coding gene | methyltransferase like 27 | |
Tssr49106 | 5 | 27 | + | TSS region | transcription start site region 49106 | |
Tssr53698 | 5 | 17 | - | TSS region | transcription start site region 53698 | |
Tssr1660 | 5 | 1 | + | TSS region | transcription start site region 1660 | |
Cldn4 | 5 | 1811 | - | protein coding gene | claudin 4 | |
Tssr49107 | 5 | 4 | + | TSS region | transcription start site region 49107 | |
Tssr53699 | 5 | 7 | - | TSS region | transcription start site region 53699 | |
Tssr49108 | 5 | 39 | + | TSS region | transcription start site region 49108 | |
Tssr53700 | 5 | 20 | - | TSS region | transcription start site region 53700 | |
Tssr53701 | 5 | 10 | - | TSS region | transcription start site region 53701 | |
Cpgi16731 | 5 | 687 | CpG island | CpG island 16731 | ||
Tssr49109 | 5 | 62 | + | TSS region | transcription start site region 49109 | |
Tssr53702 | 5 | 16 | - | TSS region | transcription start site region 53702 | |
Tssr53703 | 5 | 4 | - | TSS region | transcription start site region 53703 | |
Tssr53704 | 5 | 10 | - | TSS region | transcription start site region 53704 | |
Tssr53705 | 5 | 28 | - | TSS region | transcription start site region 53705 | |
Tssr53706 | 5 | 27 | - | TSS region | transcription start site region 53706 | |
Cpgi16732 | 5 | 163 | CpG island | CpG island 16732 | ||
D5Mit322 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 322 | ||
Tssr49110 | 5 | 45 | + | TSS region | transcription start site region 49110 | |
Cpgi16733 | 5 | 668 | CpG island | CpG island 16733 | ||
Tssr53707 | 5 | 13 | - | TSS region | transcription start site region 53707 | |
Tssr53708 | 5 | 10 | - | TSS region | transcription start site region 53708 | |
Tssr49111 | 5 | 20 | + | TSS region | transcription start site region 49111 | |
Cpgi16734 | 5 | 1650 | CpG island | CpG island 16734 | ||
Tssr49112 | 5 | 17 | + | TSS region | transcription start site region 49112 | |
Tssr49113 | 5 | 3 | + | TSS region | transcription start site region 49113 | |
Tssr49114 | 5 | 79 | + | TSS region | transcription start site region 49114 | |
Cldn3 | 5 | 1258 | + | protein coding gene | claudin 3 | |
Tssr49115 | 5 | 16 | + | TSS region | transcription start site region 49115 | |
Tssr49116 | 5 | 21 | + | TSS region | transcription start site region 49116 | |
Tssr49117 | 5 | 13 | + | TSS region | transcription start site region 49117 | |
Tssr49118 | 5 | 23 | + | TSS region | transcription start site region 49118 | |
Wbscr25 | 5 | 13917 | - | antisense lncRNA gene | Williams Beuren syndrome chromosome region 25 (human) | |
Tssr49119 | 5 | 6 | + | TSS region | transcription start site region 49119 | |
Tssr53709 | 5 | 5 | - | TSS region | transcription start site region 53709 | |
Tssr53710 | 5 | 7 | - | TSS region | transcription start site region 53710 | |
Tssr53711 | 5 | 10 | - | TSS region | transcription start site region 53711 | |
Tssr53712 | 5 | 5 | - | TSS region | transcription start site region 53712 | |
Tssr53713 | 5 | 73 | - | TSS region | transcription start site region 53713 | |
Tssr53714 | 5 | 11 | - | TSS region | transcription start site region 53714 | |
Cpgi16735 | 5 | 191 | CpG island | CpG island 16735 | ||
Rps29-ps | 5 | 171 | + | pseudogene | ribosomal protein S29, pseudogene | |
Gm43372 | 5 | 3015 | - | unclassified gene | predicted gene 43372 | |
Cpgi16736 | 5 | 1574 | CpG island | CpG island 16736 | ||
Tssr53715 | 5 | 21 | - | TSS region | transcription start site region 53715 | |
Tssr53716 | 5 | 22 | - | TSS region | transcription start site region 53716 | |
Abhd11 | 5 | 3023 | + | protein coding gene | abhydrolase domain containing 11 | |
Tssr49120 | 5 | 10 | + | TSS region | transcription start site region 49120 | |
Tssr49121 | 5 | 15 | + | TSS region | transcription start site region 49121 | |
Tssr49122 | 5 | 66 | + | TSS region | transcription start site region 49122 | |
Tssr49123 | 5 | 26 | + | TSS region | transcription start site region 49123 | |
Tssr49124 | 5 | 17 | + | TSS region | transcription start site region 49124 | |
Tssr49125 | 5 | 9 | + | TSS region | transcription start site region 49125 | |
Tssr49126 | 5 | 11 | + | TSS region | transcription start site region 49126 | |
Tssr49127 | 5 | 11 | + | TSS region | transcription start site region 49127 | |
Tssr49128 | 5 | 82 | + | TSS region | transcription start site region 49128 | |
Tssr1661 | 5 | 11 | + | TSS region | transcription start site region 1661 | |
Abhd11os | 5 | 1035 | - | antisense lncRNA gene | abhydrolase domain containing 11, opposite strand | |
Tssr1662 | 5 | 10 | - | TSS region | transcription start site region 1662 | |
Tssr53717 | 5 | 15 | - | TSS region | transcription start site region 53717 | |
Tssr53718 | 5 | 46 | - | TSS region | transcription start site region 53718 | |
Tssr53719 | 5 | 11 | - | TSS region | transcription start site region 53719 | |
Tssr53720 | 5 | 11 | - | TSS region | transcription start site region 53720 | |
Tssr53721 | 5 | 11 | - | TSS region | transcription start site region 53721 | |
Tssr53722 | 5 | 27 | - | TSS region | transcription start site region 53722 | |
Tssr1663 | 5 | 11 | - | TSS region | transcription start site region 1663 | |
Tssr1664 | 5 | 27 | - | TSS region | transcription start site region 1664 | |
Cpgi16737 | 5 | 840 | CpG island | CpG island 16737 | ||
Stx1a | 5 | 27618 | + | protein coding gene | syntaxin 1A (brain) | |
Tssr49129 | 5 | 1 | + | TSS region | transcription start site region 49129 | |
Tssr49130 | 5 | 59 | + | TSS region | transcription start site region 49130 | |
Tssr49131 | 5 | 40 | + | TSS region | transcription start site region 49131 | |
Cpgi16738 | 5 | 283 | CpG island | CpG island 16738 | ||
Bud23 | 5 | 11709 | - | protein coding gene | BUD23, rRNA methyltransferase and ribosome maturation factor | |
Tssr1665 | 5 | 23 | - | TSS region | transcription start site region 1665 | |
Gm25492 | 5 | 128 | - | snoRNA gene | predicted gene, 25492 | |
D5Mit325 | 5 | 119 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 325 | ||
Cpgi16739 | 5 | 1251 | CpG island | CpG island 16739 | ||
Tssr53723 | 5 | 9 | - | TSS region | transcription start site region 53723 | |
Tssr53724 | 5 | 53 | - | TSS region | transcription start site region 53724 | |
Dnajc30 | 5 | 1159 | + | protein coding gene | DnaJ heat shock protein family (Hsp40) member C30 | |
Tssr49132 | 5 | 34 | + | TSS region | transcription start site region 49132 | |
Vps37d | 5 | 5366 | - | protein coding gene | vacuolar protein sorting 37D | |
Cpgi16740 | 5 | 964 | CpG island | CpG island 16740 | ||
Tssr53725 | 5 | 36 | - | TSS region | transcription start site region 53725 | |
Tssr53726 | 5 | 35 | - | TSS region | transcription start site region 53726 | |
Tssr53727 | 5 | 32 | - | TSS region | transcription start site region 53727 | |
Cpgi16741 | 5 | 719 | CpG island | CpG island 16741 | ||
Tssr49133 | 5 | 12 | + | TSS region | transcription start site region 49133 | |
Mlxipl | 5 | 48491 | + | protein coding gene | MLX interacting protein-like | |
Tssr49134 | 5 | 14 | + | TSS region | transcription start site region 49134 | |
Cpgi16742 | 5 | 1726 | CpG island | CpG island 16742 | ||
Tssr49135 | 5 | 37 | + | TSS region | transcription start site region 49135 | |
Tssr49136 | 5 | 34 | + | TSS region | transcription start site region 49136 | |
Gm43500 | 5 | 883 | - | antisense lncRNA gene | predicted gene 43500 | |
Tssr49137 | 5 | 26 | + | TSS region | transcription start site region 49137 |