Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134337661-134476716

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr53639	5	134344229 to 134344242	13	-	TSS region	transcription start site region 53639
Gm46925	5	134348501 to 134349846	1345	+	lncRNA gene	predicted gene, 46925
Gm7033	5	134353278 to 134355199	1921	+	pseudogene	predicted gene 7033
Gtf2ird1	5	134357661 to 134456716	99055	-	protein coding gene	general transcription factor II I repeat domain-containing 1
Tssr53640	5	134386215 to 134386219	4	-	TSS region	transcription start site region 53640
Tssr1658	5	134394835 to 134394876	41	+	TSS region	transcription start site region 1658
n-R5s178	5	134416239 to 134416352	113	+	rRNA gene	nuclear encoded rRNA 5S 178
Tssr53641	5	134434366 to 134434370	4	-	TSS region	transcription start site region 53641
Gm26340	5	134448574 to 134448672	98	+	miRNA gene	predicted gene, 26340
Gm42882	5	134455990 to 134458030	2040	+	antisense lncRNA gene	predicted gene 42882
Cpgi16719	5	134456101 to 134457012	911		CpG island	CpG island 16719
Tssr53642	5	134456227 to 134456263	36	-	TSS region	transcription start site region 53642
Tssr53643	5	134456702 to 134456785	83	-	TSS region	transcription start site region 53643
Gm16020	5	134463240 to 134463449	209	+	pseudogene	predicted gene 16020