Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gtf2i | 5 | 76926 | - | protein coding gene | general transcription factor II I | |
Del(5Gtf2i-Limk1)1Uta | 5 | 450764 | chromosomal deletion | deletion, Chr 5, Uta Francke 1 | ||
Gm43481 | 5 | 3671 | - | unclassified gene | predicted gene 43481 | |
Tssr53622 | 5 | 4 | - | TSS region | transcription start site region 53622 | |
Tssr53623 | 5 | 4 | - | TSS region | transcription start site region 53623 | |
Tssr53624 | 5 | 5 | - | TSS region | transcription start site region 53624 | |
Tssr53625 | 5 | 6 | - | TSS region | transcription start site region 53625 | |
Gm43480 | 5 | 415 | - | sense intronic lncRNA gene | predicted gene 43480 | |
Tssr53626 | 5 | 9 | - | TSS region | transcription start site region 53626 | |
Tssr53627 | 5 | 13 | - | TSS region | transcription start site region 53627 | |
Tssr53628 | 5 | 4 | - | TSS region | transcription start site region 53628 | |
Tssr53629 | 5 | 4 | - | TSS region | transcription start site region 53629 | |
Cpgi16718 | 5 | 1765 | CpG island | CpG island 16718 | ||
Tssr49086 | 5 | 18 | + | TSS region | transcription start site region 49086 | |
Tssr49087 | 5 | 23 | + | TSS region | transcription start site region 49087 | |
Tssr53630 | 5 | 33 | - | TSS region | transcription start site region 53630 | |
Tssr49088 | 5 | 12 | + | TSS region | transcription start site region 49088 | |
Tssr53631 | 5 | 18 | - | TSS region | transcription start site region 53631 | |
Tssr53632 | 5 | 9 | - | TSS region | transcription start site region 53632 | |
Tssr53633 | 5 | 17 | - | TSS region | transcription start site region 53633 | |
Tssr53634 | 5 | 14 | - | TSS region | transcription start site region 53634 | |
Tssr53635 | 5 | 34 | - | TSS region | transcription start site region 53635 | |
Tssr53636 | 5 | 13 | - | TSS region | transcription start site region 53636 | |
Tssr53637 | 5 | 39 | - | TSS region | transcription start site region 53637 | |
Tssr53638 | 5 | 43 | - | TSS region | transcription start site region 53638 | |
Tssr49089 | 5 | 46 | + | TSS region | transcription start site region 49089 | |
Tssr1657 | 5 | 2 | - | TSS region | transcription start site region 1657 | |
Gm46924 | 5 | 2685 | + | lncRNA gene | predicted gene, 46924 | |
Mir3965 | 5 | 68 | + | miRNA gene | microRNA 3965 | |
Tssr53639 | 5 | 13 | - | TSS region | transcription start site region 53639 | |
Gm46925 | 5 | 1345 | + | lncRNA gene | predicted gene, 46925 | |
Gm7033 | 5 | 1921 | + | pseudogene | predicted gene 7033 | |
Gtf2ird1 | 5 | 99055 | - | protein coding gene | general transcription factor II I repeat domain-containing 1 | |
Tssr53640 | 5 | 4 | - | TSS region | transcription start site region 53640 | |
Tssr1658 | 5 | 41 | + | TSS region | transcription start site region 1658 | |
n-R5s178 | 5 | 113 | + | rRNA gene | nuclear encoded rRNA 5S 178 | |
Tssr53641 | 5 | 4 | - | TSS region | transcription start site region 53641 | |
Gm26340 | 5 | 98 | + | miRNA gene | predicted gene, 26340 | |
Gm42882 | 5 | 2040 | + | antisense lncRNA gene | predicted gene 42882 | |
Cpgi16719 | 5 | 911 | CpG island | CpG island 16719 | ||
Tssr53642 | 5 | 36 | - | TSS region | transcription start site region 53642 | |
Tssr53643 | 5 | 83 | - | TSS region | transcription start site region 53643 | |
Gm16020 | 5 | 209 | + | pseudogene | predicted gene 16020 | |
Gm42885 | 5 | 4213 | - | unclassified gene | predicted gene 42885 | |
D5Lec1 | 5 | 577 | DNA segment | DNA segment, Chr 5, Laboratory of Experimental Carcinogenesis 1 | ||
Clip2 | 5 | 63051 | - | protein coding gene | CAP-GLY domain containing linker protein 2 | |
2700029L08Rik | 5 | 1464 | - | unclassified gene | RIKEN cDNA 2700029L08 gene | |
Tssr53644 | 5 | 13 | - | TSS region | transcription start site region 53644 | |
Cpgi16720 | 5 | 293 | CpG island | CpG island 16720 | ||
Tssr53645 | 5 | 8 | - | TSS region | transcription start site region 53645 | |
Cpgi16721 | 5 | 1379 | CpG island | CpG island 16721 | ||
Gm42884 | 5 | 6438 | + | antisense lncRNA gene | predicted gene 42884 | |
Tssr53646 | 5 | 94 | - | TSS region | transcription start site region 53646 | |
Tssr53647 | 5 | 41 | - | TSS region | transcription start site region 53647 | |
Tssr53648 | 5 | 32 | - | TSS region | transcription start site region 53648 | |
Tssr53649 | 5 | 30 | - | TSS region | transcription start site region 53649 | |
Tssr53650 | 5 | 23 | - | TSS region | transcription start site region 53650 | |
Cpgi16722 | 5 | 185 | CpG island | CpG island 16722 | ||
Syna | 5 | 2025 | - | protein coding gene | syncytin a | |
Cpgi16723 | 5 | 388 | CpG island | CpG island 16723 | ||
Tssr53651 | 5 | 20 | - | TSS region | transcription start site region 53651 | |
Tssr53652 | 5 | 17 | - | TSS region | transcription start site region 53652 | |
Tssr53653 | 5 | 15 | - | TSS region | transcription start site region 53653 | |
Mir7228 | 5 | 38 | + | miRNA gene | microRNA 7228 | |
Cpgi16724 | 5 | 660 | CpG island | CpG island 16724 | ||
Rfc2 | 5 | 15638 | + | protein coding gene | replication factor C (activator 1) 2 | |
Tssr49090 | 5 | 7 | + | TSS region | transcription start site region 49090 | |
Tssr49091 | 5 | 52 | + | TSS region | transcription start site region 49091 | |
Tssr49092 | 5 | 11 | + | TSS region | transcription start site region 49092 | |
Tssr49093 | 5 | 8 | + | TSS region | transcription start site region 49093 | |
Lat2 | 5 | 15003 | - | protein coding gene | linker for activation of T cells family, member 2 | |
Tssr49094 | 5 | 50 | + | TSS region | transcription start site region 49094 | |
Tssr53654 | 5 | 5 | - | TSS region | transcription start site region 53654 | |
Tssr53655 | 5 | 18 | - | TSS region | transcription start site region 53655 | |
Tssr53656 | 5 | 12 | - | TSS region | transcription start site region 53656 | |
Tssr49095 | 5 | 43 | + | TSS region | transcription start site region 49095 | |
Tssr49096 | 5 | 13 | + | TSS region | transcription start site region 49096 | |
Tssr49097 | 5 | 8 | + | TSS region | transcription start site region 49097 | |
Tssr53657 | 5 | 76 | - | TSS region | transcription start site region 53657 | |
Eif4h | 5 | 19537 | - | protein coding gene | eukaryotic translation initiation factor 4H | |
Tssr53658 | 5 | 43 | - | TSS region | transcription start site region 53658 | |
Tssr53659 | 5 | 2 | - | TSS region | transcription start site region 53659 | |
Cpgi16725 | 5 | 1368 | CpG island | CpG island 16725 | ||
Tssr53660 | 5 | 16 | - | TSS region | transcription start site region 53660 | |
Tssr53661 | 5 | 37 | - | TSS region | transcription start site region 53661 | |
Tssr53662 | 5 | 7 | - | TSS region | transcription start site region 53662 | |
Tssr53663 | 5 | 36 | - | TSS region | transcription start site region 53663 | |
Tssr53664 | 5 | 5 | - | TSS region | transcription start site region 53664 | |
Del(5Limk1-Trim50)2Uta | 5 | 711966 | chromosomal deletion | deletion, Chr 5, Uta Francke 2 | ||
Limk1 | 5 | 32559 | - | protein coding gene | LIM-domain containing, protein kinase | |
Tssr53665 | 5 | 49 | - | TSS region | transcription start site region 53665 | |
Tssr53666 | 5 | 28 | - | TSS region | transcription start site region 53666 | |
Gm10369 | 5 | 3655 | + | antisense lncRNA gene | predicted gene 10369 | |
Tssr49098 | 5 | 19 | + | TSS region | transcription start site region 49098 | |
Tssr49099 | 5 | 24 | + | TSS region | transcription start site region 49099 | |
Tssr53667 | 5 | 64 | - | TSS region | transcription start site region 53667 | |
Cpgi16726 | 5 | 1330 | CpG island | CpG island 16726 | ||
Tssr53668 | 5 | 7 | - | TSS region | transcription start site region 53668 | |
Tssr53669 | 5 | 19 | - | TSS region | transcription start site region 53669 | |
Tssr53670 | 5 | 42 | - | TSS region | transcription start site region 53670 | |
Tssr53671 | 5 | 11 | - | TSS region | transcription start site region 53671 | |
Eln | 5 | 44730 | - | protein coding gene | elastin | |
Tssr53672 | 5 | 10 | - | TSS region | transcription start site region 53672 | |
Tssr53673 | 5 | 5 | - | TSS region | transcription start site region 53673 | |
Tssr49100 | 5 | 15 | + | TSS region | transcription start site region 49100 | |
Tssr53674 | 5 | 20 | - | TSS region | transcription start site region 53674 | |
Tssr53675 | 5 | 5 | - | TSS region | transcription start site region 53675 | |
Tssr53676 | 5 | 12 | - | TSS region | transcription start site region 53676 | |
Tssr53677 | 5 | 16 | - | TSS region | transcription start site region 53677 | |
Tssr53678 | 5 | 15 | - | TSS region | transcription start site region 53678 | |
Tssr53679 | 5 | 18 | - | TSS region | transcription start site region 53679 | |
Tssr53680 | 5 | 18 | - | TSS region | transcription start site region 53680 | |
Tssr53681 | 5 | 20 | - | TSS region | transcription start site region 53681 | |
Tssr49101 | 5 | 11 | + | TSS region | transcription start site region 49101 | |
Tssr53682 | 5 | 42 | - | TSS region | transcription start site region 53682 | |
Tssr53683 | 5 | 12 | - | TSS region | transcription start site region 53683 | |
Tssr53684 | 5 | 48 | - | TSS region | transcription start site region 53684 | |
Tssr53685 | 5 | 38 | - | TSS region | transcription start site region 53685 | |
Tssr53686 | 5 | 12 | - | TSS region | transcription start site region 53686 | |
Tssr49102 | 5 | 26 | + | TSS region | transcription start site region 49102 | |
Tssr53687 | 5 | 4 | - | TSS region | transcription start site region 53687 | |
Tssr53688 | 5 | 19 | - | TSS region | transcription start site region 53688 | |
Tssr53689 | 5 | 13 | - | TSS region | transcription start site region 53689 | |
Tssr53690 | 5 | 4 | - | TSS region | transcription start site region 53690 | |
D5Mit282 | 5 | 101 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 282 | ||
Cpgi16727 | 5 | 345 | CpG island | CpG island 16727 | ||
Gm30003 | 5 | 75924 | + | antisense lncRNA gene | predicted gene, 30003 | |
Tssr53691 | 5 | 17 | - | TSS region | transcription start site region 53691 | |
Tssr53692 | 5 | 30 | - | TSS region | transcription start site region 53692 | |
Tssr49103 | 5 | 3 | + | TSS region | transcription start site region 49103 | |
Cpgi16728 | 5 | 197 | CpG island | CpG island 16728 | ||
D5Dcr13 | 5 | 95 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 13 | ||
D5Mit219 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 219 | ||
Tssr49104 | 5 | 3 | + | TSS region | transcription start site region 49104 | |
Tmem270 | 5 | 5140 | - | protein coding gene | transmembrane protein 270 | |
Tssr53693 | 5 | 5 | - | TSS region | transcription start site region 53693 | |
Tssr53694 | 5 | 18 | - | TSS region | transcription start site region 53694 | |
Cpgi16729 | 5 | 227 | CpG island | CpG island 16729 | ||
Cldn13 | 5 | 1277 | - | protein coding gene | claudin 13 | |
Tssr1659 | 5 | 21 | - | TSS region | transcription start site region 1659 | |
Tssr53695 | 5 | 16 | - | TSS region | transcription start site region 53695 | |
Tssr53696 | 5 | 11 | - | TSS region | transcription start site region 53696 | |
Tssr53697 | 5 | 30 | - | TSS region | transcription start site region 53697 | |
4933439J24Rik | 5 | 852 | + | lincRNA gene | RIKEN cDNA 4933439J24 gene | |
9030607J07Rik | 5 | 1621 | - | lncRNA gene | RIKEN cDNA 9030607J07 gene | |
Cpgi16730 | 5 | 696 | CpG island | CpG island 16730 | ||
Tssr49105 | 5 | 31 | + | TSS region | transcription start site region 49105 | |
Mettl27 | 5 | 10269 | + | protein coding gene | methyltransferase like 27 | |
Tssr49106 | 5 | 27 | + | TSS region | transcription start site region 49106 | |
Tssr53698 | 5 | 17 | - | TSS region | transcription start site region 53698 | |
Tssr1660 | 5 | 1 | + | TSS region | transcription start site region 1660 | |
Cldn4 | 5 | 1811 | - | protein coding gene | claudin 4 | |
Tssr49107 | 5 | 4 | + | TSS region | transcription start site region 49107 | |
Tssr53699 | 5 | 7 | - | TSS region | transcription start site region 53699 | |
Tssr49108 | 5 | 39 | + | TSS region | transcription start site region 49108 | |
Tssr53700 | 5 | 20 | - | TSS region | transcription start site region 53700 | |
Tssr53701 | 5 | 10 | - | TSS region | transcription start site region 53701 | |
Cpgi16731 | 5 | 687 | CpG island | CpG island 16731 | ||
Tssr49109 | 5 | 62 | + | TSS region | transcription start site region 49109 | |
Tssr53702 | 5 | 16 | - | TSS region | transcription start site region 53702 | |
Tssr53703 | 5 | 4 | - | TSS region | transcription start site region 53703 | |
Tssr53704 | 5 | 10 | - | TSS region | transcription start site region 53704 | |
Tssr53705 | 5 | 28 | - | TSS region | transcription start site region 53705 | |
Tssr53706 | 5 | 27 | - | TSS region | transcription start site region 53706 | |
Cpgi16732 | 5 | 163 | CpG island | CpG island 16732 | ||
D5Mit322 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 322 |