Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:130245619-130351563

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sbds 5 130245731 to 130255530 9799 - protein coding gene SBDS ribosome maturation factor
Tssr53531 5 130245944 to 130245949 5 - TSS region transcription start site region 53531
Tssr53532 5 130248048 to 130248052 4 - TSS region transcription start site region 53532
Tssr53533 5 130250882 to 130250899 17 - TSS region transcription start site region 53533
Tssr53534 5 130254248 to 130254252 4 - TSS region transcription start site region 53534
Tssr53535 5 130254376 to 130254431 55 - TSS region transcription start site region 53535
Cpgi16698 5 130255022 to 130255699 677 CpG island CpG island 16698
Tssr53536 5 130255330 to 130255339 9 - TSS region transcription start site region 53536
Tssr53537 5 130255343 to 130255378 35 - TSS region transcription start site region 53537
Tssr53538 5 130255380 to 130255391 11 - TSS region transcription start site region 53538
Tssr53539 5 130255394 to 130255399 5 - TSS region transcription start site region 53539
Tssr53540 5 130255409 to 130255418 9 - TSS region transcription start site region 53540
Tssr53541 5 130255422 to 130255509 87 - TSS region transcription start site region 53541
Tssr53542 5 130255525 to 130255537 12 - TSS region transcription start site region 53542
Tssr49055 5 130255590 to 130255630 40 + TSS region transcription start site region 49055
Tyw1 5 130255619 to 130341563 85944 + protein coding gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Tssr53543 5 130256804 to 130256809 5 - TSS region transcription start site region 53543
Cpgi16699 5 130256840 to 130257218 378 CpG island CpG island 16699
Tssr49056 5 130257029 to 130257072 43 + TSS region transcription start site region 49056
Tssr49057 5 130280942 to 130280952 10 + TSS region transcription start site region 49057
D5Mit245 5 130300108 to 130300252 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 245