Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:130174931-130234938

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rabgef1 5 130171798 to 130214342 42544 + protein coding gene RAB guanine nucleotide exchange factor (GEF) 1
Tssr49043 5 130187158 to 130187166 8 + TSS region transcription start site region 49043
Tssr49044 5 130187189 to 130187203 14 + TSS region transcription start site region 49044
Gm15920 5 130188395 to 130188796 401 + pseudogene predicted gene 15920
Tssr49045 5 130188423 to 130188425 2 + TSS region transcription start site region 49045
Tssr49046 5 130204931 to 130204938 7 + TSS region transcription start site region 49046
Gm15921 5 130208080 to 130208562 482 - pseudogene predicted gene 15921
Tssr1647 5 130213742 to 130213746 4 + TSS region transcription start site region 1647
Tssr49047 5 130219534 to 130219549 15 + TSS region transcription start site region 49047
Tssr49048 5 130219706 to 130219720 14 + TSS region transcription start site region 49048
Tmem248 5 130219744 to 130243765 24021 + protein coding gene transmembrane protein 248
Gm6598 5 130220451 to 130223063 2612 - antisense lncRNA gene predicted gene 6598
Cpgi16697 5 130221898 to 130222930 1032 CpG island CpG island 16697
Tssr53530 5 130222216 to 130222233 17 - TSS region transcription start site region 53530
Tssr49049 5 130222302 to 130222316 14 + TSS region transcription start site region 49049
Tssr49050 5 130222328 to 130222390 62 + TSS region transcription start site region 49050
Tssr49051 5 130222391 to 130222403 12 + TSS region transcription start site region 49051
Tssr49052 5 130222410 to 130222425 15 + TSS region transcription start site region 49052
Tssr49053 5 130223913 to 130223929 16 + TSS region transcription start site region 49053
Tssr1648 5 130224163 to 130224169 6 + TSS region transcription start site region 1648
Gm42467 5 130226216 to 130227662 1446 + unclassified gene predicted gene 42467