Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:130166798-130219342

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16696	5	130171358 to 130172583	1225		CpG island	CpG island 16696
Tssr53522	5	130171541 to 130171568	27	-	TSS region	transcription start site region 53522
Tssr53523	5	130171570 to 130171590	20	-	TSS region	transcription start site region 53523
Tssr53524	5	130171724 to 130171748	24	-	TSS region	transcription start site region 53524
Rabgef1	5	130171798 to 130214342	42544	+	protein coding gene	RAB guanine nucleotide exchange factor (GEF) 1
Tssr49042	5	130171813 to 130171879	66	+	TSS region	transcription start site region 49042
Tssr53525	5	130172348 to 130172362	14	-	TSS region	transcription start site region 53525
Tssr53526	5	130172410 to 130172440	30	-	TSS region	transcription start site region 53526
Tssr53527	5	130172462 to 130172471	9	-	TSS region	transcription start site region 53527
Tssr53528	5	130172573 to 130172585	12	-	TSS region	transcription start site region 53528
Tssr53529	5	130172596 to 130172606	10	-	TSS region	transcription start site region 53529
Tssr49043	5	130187158 to 130187166	8	+	TSS region	transcription start site region 49043
Tssr49044	5	130187189 to 130187203	14	+	TSS region	transcription start site region 49044
Gm15920	5	130188395 to 130188796	401	+	pseudogene	predicted gene 15920
Tssr49045	5	130188423 to 130188425	2	+	TSS region	transcription start site region 49045
Tssr49046	5	130204931 to 130204938	7	+	TSS region	transcription start site region 49046
Gm15921	5	130208080 to 130208562	482	-	pseudogene	predicted gene 15921
Tssr1647	5	130213742 to 130213746	4	+	TSS region	transcription start site region 1647