Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:129888548-129948569

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16685 5 129895427 to 129896073 646 CpG island CpG island 16685
Zbed5 5 129895723 to 129903623 7900 + protein coding gene zinc finger, BED type containing 5
Tssr49022 5 129895746 to 129895800 54 + TSS region transcription start site region 49022
Cpgi16686 5 129908305 to 129909175 870 CpG island CpG island 16686
Tssr49023 5 129908538 to 129908593 55 + TSS region transcription start site region 49023
Nupr1l 5 129908540 to 129913789 5249 + protein coding gene nuclear protein transcriptional regulator 1 like
Tssr49024 5 129908598 to 129908616 18 + TSS region transcription start site region 49024
Tssr53502 5 129918370 to 129918380 10 - TSS region transcription start site region 53502
Tssr49025 5 129918548 to 129918569 21 + TSS region transcription start site region 49025
Cpgi16687 5 129941318 to 129942066 748 CpG island CpG island 16687
Tssr49026 5 129941902 to 129941940 38 + TSS region transcription start site region 49026
Tssr49027 5 129941949 to 129941971 22 + TSS region transcription start site region 49027
Tssr49028 5 129942042 to 129942088 46 + TSS region transcription start site region 49028
Vkorc1l1 5 129942109 to 129986692 44583 + protein coding gene vitamin K epoxide reductase complex, subunit 1-like 1
Cpgi16688 5 129942332 to 129942814 482 CpG island CpG island 16688
Gm42986 5 129945580 to 129948964 3384 + unclassified gene predicted gene 42986