Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:129853268-129893273

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sumf2 5 129846990 to 129863951 16961 + protein coding gene sulfatase modifying factor 2
Cpgi16682 5 129854668 to 129854929 261 CpG island CpG island 16682
Phkg1 5 129863435 to 129879083 15648 - protein coding gene phosphorylase kinase gamma 1
Cpgi16683 5 129864455 to 129864735 280 CpG island CpG island 16683
D5Mit162 5 129872980 to 129873104 124 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 162
Tssr53494 5 129873268 to 129873273 5 - TSS region transcription start site region 53494
Gm42790 5 129875979 to 129876947 968 - unclassified gene predicted gene 42790
Tssr53495 5 129879008 to 129879019 11 - TSS region transcription start site region 53495
Tssr53496 5 129879025 to 129879034 9 - TSS region transcription start site region 53496
Tssr53497 5 129879038 to 129879094 56 - TSS region transcription start site region 53497
Chchd2 5 129881161 to 129887470 6309 - protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 2
Cpgi16684 5 129886967 to 129887621 654 CpG island CpG island 16684
Tssr53498 5 129887139 to 129887157 18 - TSS region transcription start site region 53498
Tssr53499 5 129887288 to 129887305 17 - TSS region transcription start site region 53499
Tssr53500 5 129887416 to 129887429 13 - TSS region transcription start site region 53500
Tssr53501 5 129887442 to 129887480 38 - TSS region transcription start site region 53501